DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and st14

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_012821897.2 Gene:st14 / 448647 XenbaseID:XB-GENE-1008784 Length:845 Species:Xenopus tropicalis


Alignment Length:244 Identity:85/244 - (34%)
Similarity:127/244 - (52%) Gaps:30/244 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RIVGGQDTNITQYPHQISMRYRGN-HRCGGTIYRSNQIISAAHCVNTLSGPENLTIVAGSSNIW- 97
            |||||.:.:..::|.|:|:..:|| |.||.::.....:||||||..     ::.::....:::| 
 Frog   604 RIVGGVNADTGEFPWQVSLHVKGNKHTCGASLVSPTMLISAAHCFQ-----DDQSMRYSDASLWT 663

  Fly    98 ----------FPTGPQQELEVREIIIHPKYRTLNNDYDAAILILDGDFEFNDAVQPIELAKERPD 152
                      ..:....|.:::.|:.|..:.....|.|.::|.|:...::.|.:|||.:.:...|
 Frog   664 AYLGLHDQAQLNSKDVVERKIKRIMAHIGFNDNTYDNDISVLELEKPVDYTDFIQPICIPESTHD 728

  Fly   153 HDT--PVTVTGWGTTSEGGTISDVLQEVSVNVVDNSNCKNAYSIMLTSRMLCAGVNGGGKDACQG 215
            ...  |:.|||||...|||..:.:||:..:.:::.:.|.......||.||||||...||.|||||
 Frog   729 FPVGKPIWVTGWGALKEGGGAAVILQKAEIRIINQTECNKLLDGQLTPRMLCAGFVSGGIDACQG 793

  Fly   216 DSGGPL--------VYNNTLLGIVSWGTGCAREKYPGVYCSVPDVLDWL 256
            ||||||        ||   |.||||||.||||...||||..|..:.||:
 Frog   794 DSGGPLSSVELNNKVY---LAGIVSWGEGCARRNKPGVYTRVAMMRDWI 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 83/241 (34%)
Tryp_SPc 36..259 CDD:238113 84/243 (35%)
st14XP_012821897.2 SEA 76..167 CDD:396113
CUB 216..320 CDD:238001
CUB 328..432 CDD:238001
LDLa 442..474 CDD:238060
LDLa 476..511 CDD:238060
LDLa 513..547 CDD:238060
LDLa 554..587 CDD:197566
Tryp_SPc 604..839 CDD:214473 84/242 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.