DRSC/TRiP Functional Genomics Resources

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Protein Alignment lambdaTry and cfd

DIOPT Version :10

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_989320.1 Gene:cfd / 394945 XenbaseID:XB-GENE-973605 Length:265 Species:Xenopus tropicalis


Alignment Length:262 Identity:82/262 - (31%)
Similarity:124/262 - (47%) Gaps:20/262 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILVVFLVLGVGCSLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMRYRGNHRCGGTIYRS 68
            :|.|.|||.|......|            .|||:||||:.....|:..|::..|.|:|||.:...
 Frog     7 LLAVVLVLTVATYECRP------------RGRILGGQDSKAEVRPYMASIQQNGIHQCGGVLIAD 59

  Fly    69 NQIISAAHCVNTLSGPENLTIVAGSSNIWFPTGPQQELEVREIIIHPKYRTLNNDYDAAILILDG 133
            ..::|||||. |.|...:|.::.|:.::..|...:..::|...|.||.|.:....:|..:|.|..
 Frog    60 KWVLSAAHCA-TNSSNSSLNVMLGAISLSKPEKYKIVVKVLREIPHPLYNSTIKHHDLLLLELSE 123

  Fly   134 DFEFNDAVQPIELAKERPDHDT--PVTVTGWGTTSEGGTISDVLQEVSVNVVDNSNC--KNAYSI 194
            ....:.||.|:....|..|...  ...|.|||.....|...|.|||:.|.::....|  :|.|..
 Frog   124 KVTLSPAVNPLPFQNENIDISAGKRCLVAGWGQMRLTGKKPDTLQELWVPLISRDVCNRRNYYDN 188

  Fly   195 MLTSRMLCAGVNGGGKDACQGDSGGPLVYNNTLLGIVSWG-TGCAREKYPGVYCSVPDVLDWLVE 258
            .:|:.|:|||.:  .||:|:||||||||.:...:.||..| ..|.....||:|..:.....|::|
 Frog   189 EITANMICAGES--RKDSCEGDSGGPLVCDGIAVAIVQGGFRKCGNPTKPGIYTLIEPYKSWIME 251

  Fly   259 TV 260
            ::
 Frog   252 SM 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 36..259 CDD:238113 72/227 (32%)
cfdNP_989320.1 Tryp_SPc 27..251 CDD:238113 72/226 (32%)

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