DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and kappaTry

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_610674.5 Gene:kappaTry / 36215 FlyBaseID:FBgn0043471 Length:263 Species:Drosophila melanogaster


Alignment Length:273 Identity:98/273 - (35%)
Similarity:134/273 - (49%) Gaps:34/273 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVFLVLGVGCSLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMRYRGN------HRCGGT 64
            :..|:|.:|.|....|....|       |||:.|...:|.::|:.:|:|||.:      |.|.|.
  Fly     3 IPLLLLAIGFSSVISISGQPE-------GRIINGTTVDIARHPYLVSLRYRRDNESSYMHECAGV 60

  Fly    65 IYRSNQIISAAHCVNTLSGPENLTIVA--------GSSNIWFPTGPQQELEVREIIIHPKYRTLN 121
            |.....:|::|.|:..|  ||...:||        |:....:|        |.....||.|..:.
  Fly    61 IISEQALITSAQCLYGL--PEETKLVAVAGANTRNGTDGFIYP--------VANWTHHPNYDPVT 115

  Fly   122 NDYDAAILILDGDFEFN-DAVQPIELAKERPDHDTPVTVTGWGTTSEGGTISDVLQEVSVNVVDN 185
            .|.|..:|:||...:.. ..:..|.:..|||......||.|||...|.|..|..|::..|.||.:
  Fly   116 VDNDIGVLLLDTTLDLTLLGISSIGIRPERPAVGRLATVAGWGYREEWGPSSYKLEQTEVPVVSS 180

  Fly   186 SNCKNAYSI-MLTSRMLCAG-VNGGGKDACQGDSGGPLVYNNTLLGIVSWGTGCAREKYPGVYCS 248
            ..|...|.. .:|.||:||| |..||.||||||:|||||.:..|:|:||||.||||..||.|||.
  Fly   181 EQCTQIYGAGEVTERMICAGFVVQGGSDACQGDTGGPLVIDGQLVGLVSWGRGCARPNYPTVYCY 245

  Fly   249 VPDVLDWLVETVA 261
            |...:||:.||:|
  Fly   246 VASFVDWIEETIA 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 86/236 (36%)
Tryp_SPc 36..259 CDD:238113 87/239 (36%)
kappaTryNP_610674.5 Tryp_SPc 25..253 CDD:214473 87/237 (37%)
Tryp_SPc 26..256 CDD:238113 87/239 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443295
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25816
OrthoDB 1 1.010 - - D109274at50557
OrthoFinder 1 1.000 - - FOG0000678
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.960

Return to query results.
Submit another query.