DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and Prss21

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_006245934.1 Gene:Prss21 / 353251 RGDID:727870 Length:337 Species:Rattus norvegicus


Alignment Length:251 Identity:85/251 - (33%)
Similarity:129/251 - (51%) Gaps:27/251 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LDGRIVGGQDTNITQYPHQISMRYRGNHRCGGTIYRSNQIISAAHCVNTLSGPENLTIVAGS--- 93
            :..|||||::..:.::|.|.|:|..|||.||.|:.....:::||||....:.|.:.|:..|.   
  Rat    54 IPSRIVGGEEAELGRWPWQGSLRVWGNHLCGATLLNRRWVLTAAHCFQKDNDPFDWTVQFGELTS 118

  Fly    94 -SNIWFPTGPQQELEVREIIIHPKYRTLNNDYDAAILILDGDFEFNDAVQPIELAKE--RPDHDT 155
             .::|.........::.:|.:.||| |....:|.|:|.|.....:::.:|||.|...  :..:.|
  Rat   119 RPSLWNLQAYSNRYQIEDIFLSPKY-TEQFPHDIALLKLSSPVTYSNFIQPICLLNSTYKFANRT 182

  Fly   156 PVTVTGWGTTSEGGT--ISDVLQEVSVNVVDNSNC-----KNAYSIMLTSRMLCAGVNGGGKDAC 213
            ...|||||...|..:  :.:.||||.|.:::|:.|     |..:.|.:...|:|||...||||||
  Rat   183 DCWVTGWGAIGEDESLPLPNNLQEVQVAIINNTMCNHLFKKPDFRINIWGDMVCAGSPEGGKDAC 247

  Fly   214 ---------QGDSGGPLVYNNTL----LGIVSWGTGCAREKYPGVYCSVPDVLDWL 256
                     |||||||||.|...    :|:||||.||.|...||||.::....:|:
  Rat   248 FAKLTYAAPQGDSGGPLVCNQDTVWYQVGVVSWGIGCGRPNRPGVYTNISHHYNWI 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 84/245 (34%)
Tryp_SPc 36..259 CDD:238113 84/247 (34%)
Prss21XP_006245934.1 Tryp_SPc 57..303 CDD:214473 84/246 (34%)
Tryp_SPc 58..304 CDD:238113 84/247 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.