DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and Jon25Bii

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001285608.1 Gene:Jon25Bii / 33707 FlyBaseID:FBgn0031654 Length:276 Species:Drosophila melanogaster


Alignment Length:288 Identity:75/288 - (26%)
Similarity:122/288 - (42%) Gaps:55/288 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RILVVFLVLGVGCSLADPIYRNEEVH-IP-----------KLDGRIVGGQDTNITQYPHQISMRY 55
            ::.:..|.:.:.|:.|.|    |:|. :|           .::|||..|......:.|:.:.:.:
  Fly     2 KLFLTVLAVAIACAAAQP----EKVKPVPLKDAVLGSGSGSIEGRITNGYPAYEGKVPYIVGLGF 62

  Fly    56 ---RGNHRCGGTIYRSNQIISAAHCVNTLSGPENLTIVAGSSNIWFPTGPQQELEVR-------- 109
               .|...|||:|.....:|:||||.:   |..::||..|:  :|       .|:.:        
  Fly    63 SSDSGGWWCGGSIIGHTWVITAAHCTH---GAHSVTIYYGA--LW-------RLQAQYTHTVGSG 115

  Fly   110 EIIIHPKYRT--LNNDYDAAILILDGDFEFNDAVQPIELAKERPDHDT----PVTVTGWGTTSEG 168
            ....|..|.|  ||||..   ||.....:|...:..:||......||:    ....:|||...:.
  Fly   116 HFRQHSDYNTNNLNNDIS---LINTPHVDFWHLINKVELPDGNERHDSFAGWWALASGWGRPCDS 177

  Fly   169 GTISDVLQEVSVNVVDNSNCKNAYSI-MLTSRMLCAGVNGGGKDACQGDSGGPLVYN--NTLLGI 230
            ..:||.|..|...::....|.:.|.. ::|..::|.. ..|||..|.||||||||.:  :.|:|:
  Fly   178 CGVSDYLNCVDSQIITRDECSSVYGTDVITDNVICTS-TPGGKSTCAGDSGGPLVLHDRSKLVGV 241

  Fly   231 VSW--GTGCAREKYPGVYCSVPDVLDWL 256
            .|:  .:||. ...|..:..|...|||:
  Fly   242 TSFVAASGCT-SGLPDGFTRVTSYLDWI 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 65/241 (27%)
Tryp_SPc 36..259 CDD:238113 66/243 (27%)
Jon25BiiNP_001285608.1 Tryp_SPc 42..268 CDD:214473 66/242 (27%)
Tryp_SPc 43..271 CDD:238113 66/243 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25816
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
32.920

Return to query results.
Submit another query.