DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and ela2l

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_956180.1 Gene:ela2l / 334304 ZFINID:ZDB-GENE-040511-1 Length:267 Species:Danio rerio


Alignment Length:290 Identity:85/290 - (29%)
Similarity:135/290 - (46%) Gaps:62/290 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILVVFLVLGVGCSLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMRYRGN----HRCGGT 64
            :|.|.:|....|.|  |.:       |.:..|:|||.|.....:|.|||::|:..    |.|||:
Zfish     6 VLAVLVVGAYSCGL--PTF-------PPIVTRVVGGVDVRPNSWPWQISLQYKSGSNWYHTCGGS 61

  Fly    65 IYRSNQIISAAHCV------------NTLSGPENLTIVAGSSNIWFPTGPQQELEVREIIIHPKY 117
            :.....:::||||:            ::||..||.::..|:.               :||:|..:
Zfish    62 LIDKQWVLTAAHCISSSRTYRVFLGKHSLSQEENGSVAIGAG---------------KIIVHEAW 111

  Fly   118 RTLNNDYDAAILILDGDFEFNDAVQPIELAKERPD------HDTPVTVTGWGTTSEGGTISDVLQ 176
            .:.....|.|::.|:......|.:.|..|    |:      |:.|..|||||.....|.::|:||
Zfish   112 NSFTIRNDIALIKLETAVTIGDTITPACL----PEAGYVLPHNAPCYVTGWGRLYTNGPLADILQ 172

  Fly   177 EVSVNVVDNSNCKNA--YSIMLTSRMLCAGVNGGGKDA-CQGDSGGPLVYNNT-----LLGIVSW 233
            :..:.|||::.|..:  :...:|:.|:|||  |.|..| |.|||||||....:     :.||||:
Zfish   173 QALLPVVDHATCSKSDWWGSQVTTSMVCAG--GDGVVAGCDGDSGGPLNCAGSDGAWEVHGIVSF 235

  Fly   234 GTG--CAREKYPGVYCSVPDVLDWLVETVA 261
            |:|  |...|.|.|:..|....||:.:.:|
Zfish   236 GSGLSCNYNKKPTVFTRVSAYSDWISKNMA 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 75/251 (30%)
Tryp_SPc 36..259 CDD:238113 76/254 (30%)
ela2lNP_956180.1 Tryp_SPc 28..260 CDD:214473 76/252 (30%)
Tryp_SPc 29..263 CDD:238113 76/254 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.