DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and tmprss4b

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001119849.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:432 Species:Danio rerio


Alignment Length:267 Identity:108/267 - (40%)
Similarity:147/267 - (55%) Gaps:34/267 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLGVGCSLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMRYRGNHRCGGTIYRSNQIISA 74
            |:.|.||....:...:         |||||.:|:|..:|.|:|:::...|.|||::..::.||||
Zfish   185 VVSVSCSDCGEVVGED---------RIVGGVETSIEHWPWQVSLQFNHRHMCGGSLLSTSWIISA 240

  Fly    75 AHC----VNTLSGPENLTIVAGSSNIWFPTGPQQELEVREIIIHPKYRTLNNDYDAAILILDGDF 135
            |||    ...||   ..|:|.|.:.:....|    :.|..|:||..|..|.||:|.|:|.|....
Zfish   241 AHCFTGRTQELS---RWTVVLGQTKVMDVVG----VSVDMIVIHKDYNRLTNDFDIAMLKLTWPV 298

  Fly   136 EFNDAVQPIELAKERPDHDTPV----TVTGWGTTSEGGTISDVLQEVSVNVVDNSNCK--NAYSI 194
            :..:::.|:.|    |.|...:    .|||||...|||.:..|||:.||.:|:.|.|.  ..||.
Zfish   299 KTGESILPVCL----PPHQLAIKDMLVVTGWGLLKEGGALPTVLQKASVPLVNRSECSKPTIYSS 359

  Fly   195 MLTSRMLCAGVNGGGKDACQGDSGGPLVYNNT---LLGIVSWGTGCAREKYPGVYCSVPDVLDWL 256
            .:|.||||||...|..|||||||||||||.::   |:||||||.|||||..||||..|..:||| 
Zfish   360 SITPRMLCAGFLQGNVDACQGDSGGPLVYLSSRWQLIGIVSWGVGCAREGKPGVYADVTQLLDW- 423

  Fly   257 VETVADK 263
            :.||.::
Zfish   424 IYTVMER 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 100/232 (43%)
Tryp_SPc 36..259 CDD:238113 101/235 (43%)
tmprss4bNP_001119849.1 SRCR_2 100..179 CDD:292133
SRCR 105..>175 CDD:278931
Tryp_SPc 201..424 CDD:214473 102/234 (44%)
Tryp_SPc 202..427 CDD:238113 101/236 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 178 1.000 Domainoid score I3517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H80930
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.810

Return to query results.
Submit another query.