DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and CG9673

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001285346.1 Gene:CG9673 / 32649 FlyBaseID:FBgn0030775 Length:261 Species:Drosophila melanogaster


Alignment Length:268 Identity:85/268 - (31%)
Similarity:126/268 - (47%) Gaps:37/268 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVLGVGCSLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMRYRGNHRCGGTIYRSNQIIS 73
            :.||:|..:...|...|    ....|||:||:|....:||...|:||...|.|.|.|..:|.|::
  Fly     6 ITLGLGLLIFGLILSAE----ASPQGRILGGEDVAQGEYPWSASVRYNKAHVCSGAIISTNHILT 66

  Fly    74 AAHCVNTLS----GPENLTIVAGSSNIWFPTGPQQELEVREIIIHPKYRTLNNDYDAAILILDGD 134
            |||||:::.    ....|.:..|:.|.:   .....:.|:.:||||.|.  |..:|.|||.||..
  Fly    67 AAHCVSSVGITPVDASTLAVRLGTINQY---AGGSIVNVKSVIIHPSYG--NFLHDIAILELDET 126

  Fly   135 FEFNDAVQPIELA----KERPDHD------TPVTVTGWGTTSEGGTISDVLQEVSVNVVDNSNCK 189
            ..|:|.:|.|.|.    :|..|.|      |||.|.|||..|: ||.|...|:.:.|.:..|.|:
  Fly   127 LVFSDRIQDIALPPTTDEETEDVDAELPNGTPVYVAGWGELSD-GTASYKQQKANYNTLSRSLCE 190

  Fly   190 -----NAYSIMLTSRMLCAGVNGGGKDACQGDSGGPLVYNNTLL-GIVSWGTGCAREKYPGVYCS 248
                 ...|::..||       ..|:..|:||:|..::.::.:| |:.|:..|....|||.|...
  Fly   191 WEAGYGYESVVCLSR-------AEGEGICRGDAGAAVIDDDKVLRGLTSFNFGPCGSKYPDVATR 248

  Fly   249 VPDVLDWL 256
            |...|.|:
  Fly   249 VSYYLTWI 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 78/239 (33%)
Tryp_SPc 36..259 CDD:238113 78/241 (32%)
CG9673NP_001285346.1 Tryp_SPc 28..256 CDD:214473 78/240 (33%)
Tryp_SPc 29..259 CDD:238113 78/241 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.