DRSC/TRiP Functional Genomics Resources

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Protein Alignment lambdaTry and Tpsg1

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_783183.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:311 Species:Rattus norvegicus


Alignment Length:276 Identity:88/276 - (31%)
Similarity:121/276 - (43%) Gaps:57/276 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVLGV-GCSLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMRYRGNHRCGGTIYRSNQII 72
            |:|.| ||.         :..:.....|||||.......:|.|.|:|.:..|.|||::.....::
  Rat    11 LLLAVPGCG---------QPQVSHAGSRIVGGHAAQAGAWPWQASLRLQKVHVCGGSLLSPEWVL 66

  Fly    73 SAAHCVNTLSGPENLTIVAGSSNIWFPTGPQQELEVRE--IIIHPKYRTL-------------NN 122
            :||||            .:||.|     ....|:.:.|  |.:.|.:.|:             .:
  Rat    67 TAAHC------------FSGSVN-----SSDYEVHLGELTITLSPHFSTVKQIIMYSSAPGPPGS 114

  Fly   123 DYDAAILILDGDFEFNDAVQPIELAKERPDHDTPVT--VTGWGTTSEGGTISDV--LQEVSVNVV 183
            ..|.|::.|......:..|||:.|.:...|....:.  |||||.|.||..:...  |||..|:||
  Rat   115 SGDIALVQLATPVALSSQVQPVCLPEASADFHPGMQCWVTGWGYTQEGEPLKPPYNLQEAKVSVV 179

  Fly   184 DNSNCKNAYS----IMLTSRMLCAGVNGGGKDACQGDSGGPLVYNNTLL----GIVSWGTGCARE 240
            |...|..|||    .::.|.||||   .|..||||.|||||||.....:    |:||||.||.|.
  Rat   180 DVETCSQAYSSSNGSLIQSDMLCA---WGPGDACQDDSGGPLVCRVAGIWQQAGVVSWGEGCGRP 241

  Fly   241 KYPGVYCSVPDVLDWL 256
            ..||||..|...::|:
  Rat   242 DRPGVYARVTAYVNWI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 82/246 (33%)
Tryp_SPc 36..259 CDD:238113 82/248 (33%)
Tpsg1NP_783183.1 Tryp_SPc 29..257 CDD:214473 82/247 (33%)
Tryp_SPc 30..260 CDD:238113 82/248 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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