DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and Prss29

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_017453326.1 Gene:Prss29 / 287136 RGDID:1305856 Length:279 Species:Rattus norvegicus


Alignment Length:283 Identity:96/283 - (33%)
Similarity:142/283 - (50%) Gaps:48/283 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILVVFLVLGVGCSLAD-PIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMR-YRGN-----HRC 61
            :.::||    |.|:|. |....|:|.:     .||||......::|.|:|:| ||.|     |.|
  Rat     7 LTLIFL----GSSIAGIPASVPEDVLV-----GIVGGNSAPQGKWPWQVSLRVYRYNWASWVHIC 62

  Fly    62 GGTIYRSNQIISAAHCVN-TLSGPENLTIVAGSSNIWFPTGPQQELEVREIIIHPKYRTLNNDYD 125
            ||:|.....:::||||:: :.:.|....|..|...::   |.::.|:|..:||||.:.......|
  Rat    63 GGSIIHPQWVLTAAHCIHESDADPSAFRIYLGQVYLY---GGEKLLKVSRVIIHPDFVRSGLGSD 124

  Fly   126 AAILILDGDFEFNDAVQPIELAKERPDHDTPVT------VTGWGTTSEGGTISDV--LQEVSVNV 182
            .|:|.|.........|:|::|:..    ...||      |||||:.|...::...  ||:|.|.:
  Rat   125 VALLQLAQSVRSFPNVKPVKLSPA----SLEVTKKDVCWVTGWGSVSMHESLPPPYRLQQVQVKI 185

  Fly   183 VDNSNCKNAY----------SIMLTSRMLCAGVNGGGKDACQGDSGGPLVYNN----TLLGIVSW 233
            |||:.|:..|          ..::...|||||.:  |:|:|.||||||||.|.    ||:|:|||
  Rat   186 VDNTLCEKLYRNATRLSNHGQRLILQDMLCAGSH--GRDSCYGDSGGPLVCNVTGSWTLVGVVSW 248

  Fly   234 GTGCAREKYPGVYCSVPDVLDWL 256
            |.|||.:..||||..|...|.|:
  Rat   249 GYGCALKDIPGVYARVQFFLPWI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 87/248 (35%)
Tryp_SPc 36..259 CDD:238113 88/250 (35%)
Prss29XP_017453326.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.