DRSC/TRiP Functional Genomics Resources

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Protein Alignment lambdaTry and Gzmf

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_703196.2 Gene:Gzmf / 266704 RGDID:628603 Length:248 Species:Rattus norvegicus


Alignment Length:230 Identity:66/230 - (28%)
Similarity:106/230 - (46%) Gaps:18/230 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IVGGQDTNITQYPHQISMRY---RGNHR-CGGTIYRSNQIISAAHCVNTLSGPENLTIVAGSSNI 96
            |:||.:......|:...:::   .||.. |||.:.:...:::||||..     .::.::.|:.|:
  Rat    21 IIGGHEVKPHSRPYMAHVKFVKVDGNRSVCGGFLVQDYFVLTAAHCTG-----RSMKVILGAHNL 80

  Fly    97 WFPTGPQQELEVREIIIHPKYRTLNNDYDAAILILDGDFEFNDAVQPIELAKERP-DHDTP---V 157
            ......||.:.|:..|.||.|...::..|..:|.|:...:...||:|:.|  .|| |...|   .
  Rat    81 HVQEKTQQIIPVKRAIPHPAYNREDHINDIMLLKLESKAKKTRAVRPLNL--PRPNDMVKPGDVC 143

  Fly   158 TVTGWGTTSEGGT-ISDVLQEVSVNVVDNSNCKNAYSIMLTSRMLCAGVNGGGKDACQGDSGGPL 221
            .|.|||..|...| .:..|||..:.:.::..||..:.....:..:|||.....:.|.:|||||||
  Rat   144 RVAGWGQMSVDVTKRTSRLQEAKLIIQEDKECKKLFHHYSETTEICAGDPKKIQAAYKGDSGGPL 208

  Fly   222 VYNNTLLGIVSWGTGCAREKYPGVYCSVPDVLDWL 256
            |..|...|:||:|.......  ||:..|...|.|:
  Rat   209 VCENRAYGVVSYGKNGTISS--GVFTKVVYFLPWI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 65/227 (29%)
Tryp_SPc 36..259 CDD:238113 66/230 (29%)
GzmfNP_703196.2 Tryp_SPc 21..244 CDD:238113 66/230 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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