DRSC/TRiP Functional Genomics Resources

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Protein Alignment lambdaTry and Ctrb1

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_036668.1 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:268 Identity:84/268 - (31%)
Similarity:129/268 - (48%) Gaps:40/268 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FLVLGV--GCSLADPIYRNEEVHIPKLDG--RIVGGQDTNITQYPHQISMRYR-GNHRCGGTIYR 67
            |.::|.  ||.:  |..:      |.|.|  |||.|:|.....:|.|:|::.: |.|.|||::..
  Rat    10 FALVGATFGCGV--PTIQ------PVLTGLSRIVNGEDAIPGSWPWQVSLQDKTGFHFCGGSLIS 66

  Fly    68 SNQIISAAHC-VNTLSGPENLTIVAGSSNIWFPTGPQQE----LEVREIIIHPKYRTLNNDYDAA 127
            .:.:::|||| |.|..     .:|||.    |..|..:|    |::.::..:||:.......|..
  Rat    67 EDWVVTAAHCGVKTSD-----VVVAGE----FDQGSDEENIQVLKIAQVFKNPKFNMFTVRNDIT 122

  Fly   128 ILILDGDFEFNDAVQPIELAKERPDHDTP----VTVTGWGTTSEGG-TISDVLQEVSVNVVDNSN 187
            :|.|....:|::.|..:.|  ...|.|.|    ...||||.|.... ...:.||:.::.:|..::
  Rat   123 LLKLATPAQFSETVSAVCL--PNVDDDFPPGTVCATTGWGKTKYNALKTPEKLQQAALPIVSEAD 185

  Fly   188 CKNAYSIMLTSRMLCAGVNGGGKDACQGDSGGPLVYNN----TLLGIVSWGTGCAREKYPGVYCS 248
            ||.::...:|..|.|||.:  |..:|.||||||||...    ||.||||||:|......|.||..
  Rat   186 CKKSWGSKITDVMTCAGAS--GVSSCMGDSGGPLVCQKDGVWTLAGIVSWGSGVCSTSTPAVYSR 248

  Fly   249 VPDVLDWL 256
            |..::.|:
  Rat   249 VTALMPWV 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 75/234 (32%)
Tryp_SPc 36..259 CDD:238113 75/236 (32%)
Ctrb1NP_036668.1 Tryp_SPc 33..256 CDD:214473 75/235 (32%)
Tryp_SPc 34..259 CDD:238113 75/236 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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