DRSC/TRiP Functional Genomics Resources

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Protein Alignment lambdaTry and Gzmb

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:269 Identity:84/269 - (31%)
Similarity:125/269 - (46%) Gaps:44/269 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVLGVGCSLADPIYRNEEVHIPKLD-GRIVGGQDTNITQYPH----QISMRYRGNHRCGGTIYRS 68
            |:|.:..|||           ||.: |.|:||.:......|:    ||...|.|:.:|||.:.|.
  Rat     4 LLLLLSFSLA-----------PKTEAGEIIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIRE 57

  Fly    69 NQIISAAHCVNTLSGPENLTIVAGSSNIWFPTGPQQELEVREIIIHPKY--RTLNNDYDAAILIL 131
            :.:::||||    || ..:.:..|:.||......||.:.|.:||.||.|  :|::|  |..:|.|
  Rat    58 DFVLTAAHC----SG-SKINVTLGAHNIKEQEKMQQIIPVVKIIPHPAYNSKTISN--DIMLLKL 115

  Fly   132 DGDFEFNDAVQPIELAKERPDHDTPVT------VTGWGTTSEGGTISDVLQEVSVNVVDNSNC-- 188
            ....:.:.||:|:.|    |..:..|.      |.|||.....|..||.||||.:.|.::..|  
  Rat   116 KSKAKRSSAVKPLNL----PRRNVKVKPGDVCYVAGWGKLGPMGKYSDTLQEVELTVQEDQKCES 176

  Fly   189 --KNAYSIMLTSRMLCAGVNGGGKDACQGDSGGPLVYNNTLLGIVSWGTGCAREKYPGVYCSVPD 251
              ||.:.   .:..:|||.....:.:.:||||||||......||||:|....  ..|..:..|..
  Rat   177 YLKNYFD---KANEICAGDPKIKRASFRGDSGGPLVCKKVAAGIVSYGQNDG--STPRAFTKVST 236

  Fly   252 VLDWLVETV 260
            .|.|:.:|:
  Rat   237 FLSWIKKTM 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 74/235 (31%)
Tryp_SPc 36..259 CDD:238113 75/238 (32%)
GzmbNP_612526.2 Tryp_SPc 20..241 CDD:214473 74/236 (31%)
Tryp_SPc 21..244 CDD:238113 75/238 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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