DRSC/TRiP Functional Genomics Resources

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Protein Alignment lambdaTry and TMPRSS6

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001275929.1 Gene:TMPRSS6 / 164656 HGNCID:16517 Length:824 Species:Homo sapiens


Alignment Length:282 Identity:93/282 - (32%)
Similarity:132/282 - (46%) Gaps:53/282 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 CSLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMRYRGNHRCGGTIYRSNQIISAAHCV- 78
            |.|..|            ..|||||..::..::|.|.|::.||.|.|||.:.....:|:||||. 
Human   559 CGLQGP------------SSRIVGGAVSSEGEWPWQASLQVRGRHICGGALIADRWVITAAHCFQ 611

  Fly    79 -NTLSGPENLTIVAGSSNIW----FPTGPQQELEVREIIIHPKYRTLNNDYDAAILILDGDFEFN 138
             ::::.....|:..|  .:|    :|  .:...:|..:::||.:...::|||.|:|.||.....:
Human   612 EDSMASTVLWTVFLG--KVWQNSRWP--GEVSFKVSRLLLHPYHEEDSHDYDVALLQLDHPVVRS 672

  Fly   139 DAVQPIELAKERPDHDTP---VTVTGWGTTSEGG----------------------TISDVLQEV 178
            .||:|:.| ..|.....|   ..:||||...||.                      .||:.||:|
Human   673 AAVRPVCL-PARSHFFEPGLHCWITGWGALREGALRADAVALFYGWRNQGSETCCCPISNALQKV 736

  Fly   179 SVNVVDNSNCKNAYSIMLTSRMLCAGVNGGGKDACQGDSGGPLVYNNT-----LLGIVSWGTGCA 238
            .|.::....|...|...:|.||||||...|.|||||||||||||....     |.|:||||.||.
Human   737 DVQLIPQDLCSEVYRYQVTPRMLCAGYRKGKKDACQGDSGGPLVCKALSGRWFLAGLVSWGLGCG 801

  Fly   239 REKYPGVYCSVPDVLDWLVETV 260
            |..|.|||..:..|:.|:.:.|
Human   802 RPNYFGVYTRITGVISWIQQVV 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 88/255 (35%)
Tryp_SPc 36..259 CDD:238113 88/258 (34%)
TMPRSS6NP_001275929.1 SEA 77..177 CDD:307516
CUB 326..440 CDD:238001
LDLa 450..480 CDD:238060
LDLa 486..516 CDD:238060
Ldl_recept_a 520..557 CDD:278486
Tryp_SPc 568..822 CDD:238113 88/258 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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