DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and Gzme

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_034503.2 Gene:Gzme / 14942 MGIID:109265 Length:248 Species:Mus musculus


Alignment Length:262 Identity:73/262 - (27%)
Similarity:116/262 - (44%) Gaps:36/262 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILVVFLVLGVGCSLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQI---SMRYRGNHR-CGGT 64
            :|.:.|.||.|.         ||         |:||........|:..   |:...||.| |||.
Mouse     7 LLTLLLPLGAGA---------EE---------IIGGHVVKPHSRPYMAFVKSVDIEGNRRYCGGF 53

  Fly    65 IYRSNQIISAAHCVNTLSGPENLTIVAGSSNIWFPTGPQQELEVREIIIHPKYRTLNNDYDAAIL 129
            :.:.:.:::||||.|     ..:|:..|:.||......||.:.|.:.|.||.|.......|..:|
Mouse    54 LVQDDFVLTAAHCRN-----RTMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNATAFFSDIMLL 113

  Fly   130 ILDGDFEFNDAVQPIEL----AKERPDHDTPVTVTGWGTTSEGGT-ISDVLQEVSVNVVDNSNCK 189
            .|:...:...||:|::|    |:.:|  ....:|.|||:.|...| .|..|:|..:.:.::..||
Mouse   114 KLESKAKRTKAVRPLKLPRPNARVKP--GDVCSVAGWGSRSINDTKASARLREAQLVIQEDEECK 176

  Fly   190 NAYSIMLTSRMLCAGVNGGGKDACQGDSGGPLVYNNTLLGIVSWGTGCAREKYPGVYCSVPDVLD 254
            ..:.....:..:|||.....|...:||||||||.:|...|::::...  |....||:..:...|.
Mouse   177 KRFRHYTETTEICAGDLKKIKTPFKGDSGGPLVCDNKAYGLLAYAKN--RTISSGVFTKIVHFLP 239

  Fly   255 WL 256
            |:
Mouse   240 WI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 65/228 (29%)
Tryp_SPc 36..259 CDD:238113 66/230 (29%)
GzmeNP_034503.2 Tryp_SPc 20..241 CDD:214473 66/238 (28%)
Tryp_SPc 21..244 CDD:238113 66/230 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.