DRSC/TRiP Functional Genomics Resources

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Protein Alignment lambdaTry and Gzmbl3

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001316809.1 Gene:Gzmbl3 / 120766154 RGDID:2320502 Length:248 Species:Rattus norvegicus


Alignment Length:241 Identity:73/241 - (30%)
Similarity:110/241 - (45%) Gaps:28/241 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GRIVGGQDTNITQYPH----QISMRYRGNHRCGGTIYRSNQIISAAHCVNTLSGPENLTIVAGSS 94
            |.|:||.:......|:    ||.....|:..|||.:.:.:.:::||||:.:     .:|:..|:.
  Rat    19 GEIIGGHEAKPHSRPYMAYLQIMDEDSGSTMCGGFLIQEDFVLTAAHCLGS-----KITVTLGAH 78

  Fly    95 NIWFPTGPQQELEVREIIIHPKYRTLNNDYDAAILILDGDFEFNDAVQPIELA----KERPDHDT 155
            ||......||.:.|.:||.||.|.:.....|..:|.|....:...||:.:.|.    |.:|  ..
  Rat    79 NIKEQEKMQQVIPVVKIIPHPAYNSKKYSNDIMLLKLKSKAKRTRAVKTLSLPRSNFKVKP--GD 141

  Fly   156 PVTVTGWGTTSEGGTISDVLQEVSVNVVDNSNC----KNAYSIMLTSRMLCAGVNGGGKDACQGD 216
            ...|.|||.....|...|.||||.:.|.::..|    |.||:   .:..:|||.....:.:..||
  Rat   142 VCNVAGWGKLGPMGKFPDKLQEVELTVQEDQECETYFKKAYN---KANQICAGDPKIKRASFGGD 203

  Fly   217 SGGPLVYNNTLLGIVSWGT--GCAREKYPGVYCSVPDVLDWLVETV 260
            ||||||......|||::|:  |.|    |..:..|...|.|:.||:
  Rat   204 SGGPLVCKKVAAGIVAYGSKNGSA----PEAFTKVSTFLSWIKETM 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 69/233 (30%)
Tryp_SPc 36..259 CDD:238113 70/236 (30%)
Gzmbl3NP_001316809.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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