DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and Prss48

DIOPT Version :10

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001420265.1 Gene:Prss48 / 108350052 RGDID:11436036 Length:308 Species:Rattus norvegicus


Alignment Length:290 Identity:92/290 - (31%)
Similarity:135/290 - (46%) Gaps:52/290 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVVFLVLGVGC---SLADPIYRNEEVHIPKLDGRIVGGQDTNITQYPHQISMRYRGNHRCGGTIY 66
            |:|.|:|.:|.   ||............|...|||||||...:..:|.|:|:|:...|.|||::.
  Rat     6 LMVLLLLLLGAYQGSLTKQKKLQSVCGRPVYSGRIVGGQGAALGHWPWQVSLRFDSTHICGGSLI 70

  Fly    67 RSNQIISAAHCVNTLSGPENLTIVAGSSNIWF--------PTGPQQELEVREIIIHPKYRTLNND 123
            .::.:::||||:..       |..:...::|.        .||  :|..|..|:|..|:.  |.|
  Rat    71 SNHWVMTAAHCIKK-------TWFSFLYSVWLGSIDRDYSSTG--EEYYVSRIVIPSKHH--NTD 124

  Fly   124 YDAAILILDGDFEFNDAVQPIELAKERPDHDTPVT------VTGWGTTSEGGTISDVLQEVSVNV 182
            .|.|:|.|.....|...|.||.|    |:...|:|      |||||...||...| .|||:.|.:
  Rat   125 GDIALLKLSSRVTFTSLVLPICL----PNISKPLTVPASCWVTGWGQNQEGHYPS-TLQELEVPI 184

  Fly   183 VDNSNCKNAYS----------IMLTSRMLCAGVNGGGKDACQGDSGGPL------VYNNTLLGIV 231
            :....|:..|:          .::...|||||.....||:|:|||||||      |:  |.:|::
  Rat   185 ITGEACEQLYNPIGFFLPDLERIIKEDMLCAGEIQQSKDSCKGDSGGPLSCHIDGVW--TQIGVI 247

  Fly   232 SWGTGCAREKYPGVYCSVPDVLDWLVETVA 261
            |||..|.: ..||||.:|.....|:...::
  Rat   248 SWGLECGK-NLPGVYTNVTYYQKWISSIIS 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 36..259 CDD:238113 82/252 (33%)
Prss48NP_001420265.1 Tryp_SPc 40..274 CDD:238113 82/252 (33%)

Return to query results.
Submit another query.