DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and LOC101733280

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_031752096.1 Gene:LOC101733280 / 101733280 -ID:- Length:421 Species:Xenopus tropicalis


Alignment Length:259 Identity:76/259 - (29%)
Similarity:125/259 - (48%) Gaps:28/259 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RIVGGQDTNITQYPHQISMRYRGN-----HRCGGTIYRSNQIISAAHCVNTLSGPEN-LTIVAGS 93
            ||:||..|....:|..:|::: ||     |.|||:|.....:::||.|........| |.:|.|:
 Frog    28 RIIGGHHTQAGAWPWAVSIQH-GNGKDYTHFCGGSILNVKWVLTAASCFTKYKNSLNTLRLVFGA 91

  Fly    94 SNIWFPTGPQQEL-EVREIIIHPKYRTLNN-DYDAAILILDGDFEFNDAVQP-----IELAKERP 151
            .:: ...||:.:. :::::|||..|..:.. .:|.|::.|:...::||..||     |.:..|..
 Frog    92 HHL-ARLGPEVQFGKIKQLIIHENYSPIERPTHDIALVELEAAIKYNDYTQPACIPAITVNVEEK 155

  Fly   152 DHDTPVTVTGWGTTSEGGTIS-DVLQEVSVNVVDNSNC--KNAYSIMLTSRMLCAGVNGGGKDAC 213
            |   ...|:.||..:|..|.: .::||..||::....|  |..|...:....|||.......|:|
 Frog   156 D---DCYVSAWGFLNESPTETLTIMQEAQVNIIPKKTCNSKQWYKGKIKDFSLCAHYTSENSDSC 217

  Fly   214 QGDSGGPL------VYNNTLLGIVSWGTGCAREKYPGVYCSVPDVLDWL-VETVADKESVGKID 270
            .||.||||      .|...::||...|.||.:||.|.||.:....::|: |:...||.:..|::
 Frog   218 LGDVGGPLTCRRIDAYTYMVVGIAGSGYGCPKEKQPHVYTATQHYIEWIGVKIYGDKNTQVKVE 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 71/241 (29%)
Tryp_SPc 36..259 CDD:238113 72/245 (29%)
LOC101733280XP_031752096.1 Tryp_SPc 28..266 CDD:214473 71/242 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.