DRSC/TRiP Functional Genomics Resources

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Protein Alignment lambdaTry and efcab7

DIOPT Version :9

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_012816986.2 Gene:efcab7 / 100494954 XenbaseID:XB-GENE-5749161 Length:655 Species:Xenopus tropicalis


Alignment Length:184 Identity:33/184 - (17%)
Similarity:56/184 - (30%) Gaps:55/184 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LDGRIVGGQDTNITQYPHQI--SMRYRGNHRCGGTIYRSNQIISAAHCVNTLSGPENLTIVAGSS 94
            |.|......:....|.|.|.  .:.|..:.....|:::|:        ::.::..:.|.:|... 
 Frog    39 LQGHKYAASEQQENQKPQQSEEEIFYLASRAAYLTVFKSS--------LDNITNKDQLRLVLQQ- 94

  Fly    95 NIWFPTGPQQELEVREIIIHPKYRTLNNDYDAAILILD--------------------GDFEFND 139
                 ||......|......|:.:.||.|...|||..:                    |....||
 Frog    95 -----TGRNPSNRVLNKYWTPRTKQLNFDDFCAILKKEKPATKNELLKAFRNIDTYNKGYILHND 154

  Fly   140 AVQPIELAKERPDHDTPVTVTGWGTTSEGGTISDVLQEVSVNVVDNSNCKNAYS 193
            ..|.:....|:..|:               .::.|.:...|    |||.|..|:
 Frog   155 LYQVLTTKGEKMSHE---------------EVNSVFRLAEV----NSNGKLDYN 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 35..255 CDD:214473 31/181 (17%)
Tryp_SPc 36..259 CDD:238113 31/180 (17%)
efcab7XP_012816986.2 FRQ1 <84..197 CDD:227455 25/131 (19%)
EFh 434..>472 CDD:415501
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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