DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or47b and Or88a

DIOPT Version :9

Sequence 1:NP_523690.3 Gene:Or47b / 36212 FlyBaseID:FBgn0026385 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster


Alignment Length:396 Identity:90/396 - (22%)
Similarity:155/396 - (39%) Gaps:87/396 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 NKKLASLPLYRWIN-LFIMCNVMTIFWTMFVALPESKNVIEMGDDLVW-ISGMALVFTKIFYMHL 114
            |..:....|..::| ||..||...|....::..|.::|...:...:.: |.|:.|        :|
  Fly    43 NASMVPFCLSAFLNVLFFGCNGWDIIGHFWLGHPANQNPPVLSITIYFSIRGLML--------YL 99

  Fly   115 RCDEIDELISDFEYYNRELRPHNI--------DEEVLG-WQRLCYV-IESGLYINCFCLVNFFSA 169
            :..||.|.::|.:   ||. |.::        ||.... |||..:: |.|.|....||:|   ..
  Fly   100 KRKEIVEFVNDLD---REC-PRDLVSQLDMQMDETYRNFWQRYRFIRIYSHLGGPMFCVV---PL 157

  Fly   170 AIFLQPLLGEGK---LPFHSVYPFQWHRLDLHPYTFWFLYIWQSLTSQHNLMSILMVDMVGISTF 231
            |:||  |..|||   :..|......|....:.....::|.:|.         ..||....|:|.|
  Fly   158 ALFL--LTHEGKDTPVAQHEQLLGGWLPCGVRKDPNFYLLVWS---------FDLMCTTCGVSFF 211

  Fly   232 L-----------QTALNLKLLCIEIRKLGDME--VSDKRFHEEFCRVVRFHQHIIKLVGKANRAF 283
            :           ...::|..|..:...:...:  ..:|||..:...:|:..|.:..|..|.|..|
  Fly   212 VTFDNLFNVMQGHLVMHLGHLARQFSAIDPRQSLTDEKRFFVDLRLLVQRQQLLNGLCRKYNDIF 276

  Fly   284 NGAFNAQLMASF-SLISISTFETMAAAAVDPKMAAKFVL--LMLVAF-IQLSLWCVSGTLVYTQS 344
            ..||   |:::| ...|:..:..|.:...|..:.|:::|  |:||.| .::   |:.||.:...|
  Fly   277 KVAF---LVSNFVGAGSLCFYLFMLSETSDVLIIAQYILPTLVLVGFTFEI---CLRGTQLEKAS 335

  Fly   345 VEVAQAAFDINDWHTKSPGIQRDISFVIL------RAQKPLMYVAEPFLPFTLGTYMLVLKNCYR 403
             |..:::....:|:.   |.:|...|.:|      |.|:             ||.:.|:..|...
  Fly   336 -EGLESSLRSQEWYL---GSRRYRKFYLLWTQYCQRTQQ-------------LGAFGLIQVNMVH 383

  Fly   404 LLALMQ 409
            ...:||
  Fly   384 FTEIMQ 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or47bNP_523690.3 7tm_6 88..402 CDD:251636 79/350 (23%)
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 82/364 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465431
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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