DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or47b and Or42a

DIOPT Version :9

Sequence 1:NP_523690.3 Gene:Or47b / 36212 FlyBaseID:FBgn0026385 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:398 Identity:77/398 - (19%)
Similarity:156/398 - (39%) Gaps:90/398 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 FY----YVRAFLSLLCQY-PNKKLASLPLYRWINLFIMCNVMTIFWTMFVALPESKNVIEMGDDL 96
            ||    ::..::|.|.:: |.:.|.||.:.  .|.:.....:.|.|.:.....|:.|::      
  Fly    61 FYQPIGFLTGYISHLSEFSPGEFLTSLQVA--FNAWSCSTKVLIVWALVKRFDEANNLL------ 117

  Fly    97 VWISGMALVFTKIFYMHLRCDEIDELISDFEYYNRELRPH---NIDEEVLGWQRLCYVIESGLYI 158
                                ||:|..|:|   ....|:.|   ::...:..:....|::.:    
  Fly   118 --------------------DEMDRRITD---PGERLQIHRAVSLSNRIFFFFMAVYMVYA---- 155

  Fly   159 NCFCLVNFFSAAIFLQPLLGEGKLPFHSVYPF-QWHRLDLHPYTFWFLYIWQSLTSQHNLMSILM 222
                 .|.|.:|||:      |:.|:.:.||| .|....||            |..|..|....|
  Fly   156 -----TNTFLSAIFI------GRPPYQNYYPFLDWRSSTLH------------LALQAGLEYFAM 197

  Fly   223 ---------VDMVGISTFLQTALNLKLLCIEIRKLGDMEV-SDKRFHEEFCRVVRFHQHIIKLVG 277
                     ||...::..|....::.:....:|:||.... |.::.:|...:.::.|:.|::.|.
  Fly   198 AGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQDHKVILRFVD 262

  Fly   278 KANRAFNGAFNAQ-----LMASFSLISISTFETMAAAAVDPKMAAKFVLLMLVAFIQLSLWCVSG 337
            ......:|....|     |:..|:||:|..|..:.:|     :||  :..|....::.:.:|:..
  Fly   263 CLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSA-----IAA--LSFMAAVLLETTPFCILC 320

  Fly   338 TLVYTQSVEVAQAAFDINDWHTKSPGIQRDISFVILRAQKPLMYVAEPFLPFTLGTYMLVLKNCY 402
            ..:.....::|.|.|..| |..:....|:.:.:.:.:.|:|:.::|....|.::||.:.|.|..:
  Fly   321 NYLTEDCYKLADALFQSN-WIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSF 384

  Fly   403 RLLALMQE 410
            .:..|:::
  Fly   385 SVFTLVKQ 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or47bNP_523690.3 7tm_6 88..402 CDD:251636 64/332 (19%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 72/370 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465265
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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