DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or47b and Or23a

DIOPT Version :9

Sequence 1:NP_523690.3 Gene:Or47b / 36212 FlyBaseID:FBgn0026385 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_523458.3 Gene:Or23a / 33450 FlyBaseID:FBgn0026395 Length:379 Species:Drosophila melanogaster


Alignment Length:390 Identity:69/390 - (17%)
Similarity:139/390 - (35%) Gaps:75/390 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 INLFIMCNVMTI----FWT------MFVALPES---KNVIEMGDDLVWISGMALVFTKI-----F 110
            :|.:.:|..:.:    :|:      :.|.||..   :.|....|.:.....::|..|.:     |
  Fly    16 LNAWRICGALDLSEGRYWSWSMLLCILVYLPTPMLLRGVYSFEDPVENNFSLSLTVTSLSNLMKF 80

  Fly   111 YMHL----RCDEIDELISDFEY----YNRELRPHNIDEEVLGWQRLCYVIESGLYINCFCLVNFF 167
            .|::    :..|:..||...:.    .::..|..|:.|.:|...:|..:..:         |.|.
  Fly    81 CMYVAQLTKMVEVQSLIGQLDARVSGESQSERHRNMTEHLLRMSKLFQITYA---------VVFI 136

  Fly   168 SAAIFLQPLLGEGK--LPFHSVYPFQWHRLDLHPYTFWFLYIWQSLTSQHNLMSILMVDMVGIST 230
            .||:   |.:.|.:  ||....:||.|..   ....:....::|.:.....:|.....|......
  Fly   137 IAAV---PFVFETELSLPMPMWFPFDWKN---SMVAYIGALVFQEIGYVFQIMQCFAADSFPPLV 195

  Fly   231 FLQTALNLKLLCIEIRKLGDMEVSDKRFHEEFCRVVRFHQHIIKLVGKANRAFNGAFNAQLMASF 295
            ....:...:||.:.|.::|....:.:...::....:|....:.:|:.    ......:..:|..|
  Fly   196 LYLISEQCQLLILRISEIGYGYKTLEENEQDLVNCIRDQNALYRLLD----VTKSLVSYPMMVQF 256

  Fly   296 SLISISTFETMAAAAVDPKMAAKFVLL---------------MLVAFIQLSLWCVSGTLVYTQSV 345
            .:|.|:...|:            |||:               :|...:|....|..||:|.....
  Fly   257 MVIGINIAITL------------FVLIFYVETLYDRIYYLCFLLGITVQTYPLCYYGTMVQESFA 309

  Fly   346 EVAQAAFDINDWHTKSPGIQRDISFVILRAQKPLMYVAEPFLPFTLGTYMLVLKNCYRLLALMQE 410
            |:..|.| .::|..:|...:..:..:..|.::..:.:|...:|..|.||:...|..|....||.:
  Fly   310 ELHYAVF-CSNWVDQSASYRGHMLILAERTKRMQLLLAGNLVPIHLSTYVACWKGAYSFFTLMAD 373

  Fly   411  410
              Fly   374  373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or47bNP_523690.3 7tm_6 88..402 CDD:251636 60/343 (17%)
Or23aNP_523458.3 7tm_6 59..365 CDD:251636 59/337 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465258
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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