DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or47b and Or1a

DIOPT Version :9

Sequence 1:NP_523690.3 Gene:Or47b / 36212 FlyBaseID:FBgn0026385 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:455 Identity:87/455 - (19%)
Similarity:159/455 - (34%) Gaps:136/455 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLRVFLDEFRSVLRQESPGLIPRLAFYYVRAFLSLLCQYPNKK---LASLPLYRWINLFIMCNVM 73
            |:.|||            |.:....|.:.|..|.|   .|:||   |.|..||     .||| :.
  Fly     4 LIEVFL------------GNLWTQRFTFARMGLDL---QPDKKGNVLRSPLLY-----CIMC-LT 47

  Fly    74 TIF--WTMFVALPESKNVIEMGDD-----LVWISG---MALVFTKIFYMHLRCDEIDELISDFEY 128
            |.|  .|:...:.:::|.|.:..:     |..:|.   ||:...|   .|...|.|.::.|.|  
  Fly    48 TSFELCTVCAFMVQNRNQIVLCSEALMHGLQMVSSLLKMAIFLAK---SHDLVDLIQQIQSPF-- 107

  Fly   129 YNRELRPHNIDEEVLG--W--QRLCYVIESGLYINCFCLVNFFSAAIFLQPLLGEGKLPFHSVYP 189
                     .:|:::|  |  |.....:.:.:|   |.:....|.:..|.| :....|.:||...
  Fly   108 ---------TEEDLVGTEWRSQNQRGQLMAAIY---FMMCAGTSVSFLLMP-VALTMLKYHSTGE 159

  Fly   190 FQWHRLDLHPYTFWFLYIWQSLTSQH----------NLMSILMVDMVGIST-FLQTALNLKLLCI 243
            |.       |.:.:.:.:...:|..|          .::|.......|:.| :...||.:.|   
  Fly   160 FA-------PVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFFCCSTTGVDTLYGWCALGVSL--- 214

  Fly   244 EIRKLG---------------DMEVSDKRFHEEFCRVVRFHQHIIKLVGKANRAFNGAFNAQLMA 293
            :.|:||               |..:|.  ...|..|:::..||               ||     
  Fly   215 QYRRLGQQLKRIPSCFNPSRSDFGLSG--IFVEHARLLKIVQH---------------FN----- 257

  Fly   294 SFSLISISTFETMAAAAVDPKMAAKFVL------------LMLVAFIQLSLWCVSGTLVYTQSVE 346
             :|.:.|:..|.:....:...:..::::            ..||...||.::......|..::..
  Fly   258 -YSFMEIAFVEVVIICGLYCSVICQYIMPHTNQNFAFLGFFSLVVTTQLCIYLFGAEQVRLEAER 321

  Fly   347 VAQAAFDINDWHTKSPGIQRDISFVILRAQKPLMY------VAEPFLPF---TLGTYMLVLKNCY 402
            .::..:::..|....|..::...|.|.|||:..:.      :..|.|.:   |.|::..::...|
  Fly   322 FSRLLYEVIPWQNLPPKHRKLFLFPIERAQRETVLGAYFFELGRPLLVWIFRTAGSFTTLMNALY 386

  Fly   403  402
              Fly   387  386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or47bNP_523690.3 7tm_6 88..402 CDD:251636 64/372 (17%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 60/347 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465094
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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