DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fpps and GGPS1

DIOPT Version :9

Sequence 1:NP_477380.1 Gene:Fpps / 36209 FlyBaseID:FBgn0025373 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001032354.1 Gene:GGPS1 / 9453 HGNCID:4249 Length:300 Species:Homo sapiens


Alignment Length:295 Identity:77/295 - (26%)
Similarity:122/295 - (41%) Gaps:86/295 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 EMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAI-LKK--HFSHLDCYV 223
            |||.:..::.||:.|||..|||.|..|.:..:. :.||.|    |.:|.: |:|  ...|.|...
Human    54 EMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSA----NYVYFLGLEKVLTLDHPDAVK 113

  Fly   224 ----ALMELFHEITYITTCGQSLD--QLNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHL 282
                .|:|| |:       ||.||  ..::..|.:|   |.|||:|..||...     |.||:.|
Human   114 LFTRQLLEL-HQ-------GQGLDIYWRDNYTCPTE---EEYKAMVLQKTGGL-----FGLAVGL 162

  Fly   283 ----AGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGK-IGTDIQDNKCSWLAVVAM- 341
                :.||:     ..|.:|..:|.|||::||:.:.........| ...|:.:.|.|:..:.|: 
Human   163 MQLFSDYKE-----DLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW 222

  Fly   342 -------------QRA-NVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIK 392
                         ||. |::.|:..|  :..|:....|..:...|||         |.::|..| 
Human   223 SRPESTQVQNILRQRTENIDIKKYCV--HYLEDVGSFEYTRNTLKEL---------EAKAYKQI- 275

  Fly   393 THIQQTSRG--------VPHQTFLQILNKIYQRDS 419
                 .:||        |.|      |:|:::.::
Human   276 -----DARGGNPELVALVKH------LSKMFKEEN 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FppsNP_477380.1 polyprenyl_synt 119..377 CDD:278763 68/243 (28%)
GGPS1NP_001032354.1 polyprenyl_synt 9..251 CDD:395277 63/224 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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