DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fpps and ERG20

DIOPT Version :9

Sequence 1:NP_477380.1 Gene:Fpps / 36209 FlyBaseID:FBgn0025373 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_012368.1 Gene:ERG20 / 853272 SGDID:S000003703 Length:352 Species:Saccharomyces cerevisiae


Alignment Length:339 Identity:147/339 - (43%)
Similarity:214/339 - (63%) Gaps:8/339 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 FMAVFPDLVRDITTVTKAYNC-SDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNL--VPTQDLTP 148
            |:.|||.||.::.....||.. .:|..|:|..|.||.|.||.|||:..|.||..|  ...:.|..
Yeast    12 FLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQ 76

  Fly   149 ENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAILK 213
            |..:....||||:|:||::|:::||:||.|.||||||||:||..||..|||||.|:|.|:|.:||
Yeast    77 EEYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLK 141

  Fly   214 KHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNR---CVSEFTMENYKAIVENKTAYYSFYLP 275
            .||.:...|:.:.|||||:|:.|..||.:|.:.:..   .:|:|:::.:..||..||||||||||
Yeast   142 SHFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSFYLP 206

  Fly   276 FALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVA 340
            .|||:::||..|.:..:|::.:|:.:|.:||:|||:|||||.||..||||||||||||||:...|
Yeast   207 VALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFGTPEQIGKIGTDIQDNKCSWVINKA 271

  Fly   341 MQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQT--SRGVP 403
            ::.|:.||::.:.:.|||::.....:.|:::.:|.:...|..:||.....:|..|.|.  |||..
Yeast   272 LELASAEQRKTLDENYGKKDSVAEAKCKKIFNDLKIEQLYHEYEESIAKDLKAKISQVDESRGFK 336

  Fly   404 HQTFLQILNKIYQR 417
            .......|||:|:|
Yeast   337 ADVLTAFLNKVYKR 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FppsNP_477380.1 polyprenyl_synt 119..377 CDD:278763 121/262 (46%)
ERG20NP_012368.1 polyprenyl_synt 38..305 CDD:395277 123/266 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342122
Domainoid 1 1.000 263 1.000 Domainoid score I302
eggNOG 1 0.900 - - E1_COG0142
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1519
Inparanoid 1 1.050 295 1.000 Inparanoid score I516
Isobase 1 0.950 - 0 Normalized mean entropy S785
OMA 1 1.010 - - QHG54004
OrthoFinder 1 1.000 - - FOG0003736
OrthoInspector 1 1.000 - - oto99002
orthoMCL 1 0.900 - - OOG6_101661
Panther 1 1.100 - - LDO PTHR11525
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R455
SonicParanoid 1 1.000 - - X2592
TreeFam 1 0.960 - -
1615.740

Return to query results.
Submit another query.