DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fpps and PDSS2

DIOPT Version :9

Sequence 1:NP_477380.1 Gene:Fpps / 36209 FlyBaseID:FBgn0025373 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_011534258.1 Gene:PDSS2 / 57107 HGNCID:23041 Length:465 Species:Homo sapiens


Alignment Length:448 Identity:75/448 - (16%)
Similarity:152/448 - (33%) Gaps:154/448 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SPLRLQRLISTSDEVNAEP---------IIKSMDTIGGLPTELVNEQ-KLKKTSRTL-----STL 66
            ||....:::|.::::...|         :...:..|.....:||..| .|..|:|.|     ::|
Human    45 SPAHWNQVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSL 109

  Fly    67 QNHSVPIAARVTVSKDESRDFMAVFPDLV----RDITTVTKAYNCSDAAKWFAQVLQYNVPRGKK 127
            |...:.:   :.:||       |..|..|    ::...|:..|:|..:.....:::.        
Human   110 QLRGLVV---LLISK-------AAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIH-------- 156

  Fly   128 NRGILTVLTYKNLVPTQDLTPEN--IKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKV 190
                :.:|.::.:|...:|...:  :|..|: |..:.:|...|::::                  
Human   157 ----IALLVHRGIVNLNELQSSDGPLKDMQF-GNKIAILSGDFLLAN------------------ 198

  Fly   191 ENVGLTAINDALMIENAMYAILKKHFSHLDCYVALMEL----FHE-----ITYIT------TCGQ 240
                  |.|...:::|.....|...        |||:|    :||     .:|||      |..:
Human   199 ------ACNGLALLQNTKVVELLAS--------ALMDLVQGVYHENSTSKESYITDDIGISTWKE 249

  Fly   241 ----SLDQLNSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQSKT----- 296
                |...|.:..|.:...:..:.|.|:|....|..::..:..::    .|.:.|.:.||     
Human   250 QTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKIN----SDVQPFIKEKTSDSMT 310

  Fly   297 -------ILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVV--AMQRANVEQKQIM 352
                   ::|        ..:||            |.|:      |:..:  |.::..::     
Human   311 FNLNSAPVVL--------HQEFL------------GRDL------WIKQIGEAQEKGRLD----- 344

  Fly   353 VDCYGKEEPAKVERVKELY-----KELGLPSTYAIFEEESYN--MIKTHIQQTSRGVP 403
               |.||....|.:..:.:     ..||...|.|:.....::  |.|..|..|::..|
Human   345 ---YAKERGLAVTQTGDAFFMTQRMPLGFLITEALDNGRDFHWKMAKRKIWCTNKSTP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FppsNP_477380.1 polyprenyl_synt 119..377 CDD:278763 46/297 (15%)
PDSS2XP_011534258.1 Isoprenoid_Biosyn_C1 68..465 CDD:294142 71/425 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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