Protein Alignment Fpps and pdss1

DIOPT Version :10

• Sequence 1: NP_477380.1
• Gene: Fpps / 36209
• FlyBaseID: FBgn0025373
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: NP_001017656.1
• Gene: pdss1 / 550349
• ZFINID: ZDB-GENE-030131-4430
• Length: 411
• Species: Danio rerio
• Alignment Length: 371
• Identity: 78/371 - (21%)
• Similarity: 126/371 - (33%)
• Gaps: 113/371 - (30%)

  Fly    50 LVNEQKLKKT-SRTLSTLQNHSVPIAARVTVSKDESRDFMAVFPD----LVRDITTVTKAYNCSD 109
            |.::.|||.. |.....|||....|..::.|||.|.:.....:.|    ..|.:..:..|..|
Zfish    82 LHSDAKLKDPFSLVQKDLQNIYDDIKQQLLVSKAELKALCDYYFDGKGKAFRPMIVILMARAC-- 144

  Fly   110 AAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQSFFIISDDV 174
                       ||...|:  |:        |:|.|          :.:....||:.:..::.|||
Zfish   145 -----------NVHSNKE--GV--------LLPAQ----------RSIAMISEMIHTASLVHDDV 178

  Fly   175 MDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAILKKHFSHLDCYVALMELFHEITYITTCG 239
            :|:|..|||:           ..||:   :.....|||...|......:||..: ...|.::...
Zfish   179 IDDSDKRRGK-----------NTINN---VWGERKAILAGDFILSAASMALARI-GNTTVVSVLS 228

  Fly   240 QSLDQL------------NSNRCVSEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAE--- 289
            |.::.|            |.|.....:..:.:|     |||  |.......|:.:....|.|
Zfish   229 QVIEDLVRGEFMQLGSKENENERFKHYLEKTFK-----KTA--SLIANSCKAVSILVNSDPEVHE 286

  Fly   290 -AFRQSKTILLEMGNFFQVQDDFLD------CFGNPE--------VTGKIGTDIQ---------- 329
             |::..:.:    |..||:.||.||      |.|.|.        .||.:....|
Zfish   287 IAYQYGRNV----GIAFQLVDDILDFTSNANCLGKPSAADLKLGLATGPVLFACQQFPELHSMIM 347

  Fly   330 -------DNKCSWLAVVAMQRANVEQKQIMVDCYGKEEPAKVERVK 368
                   |...:|..|  ::...|||...:...|.:|...::.|::
Zfish   348 RRFSSDGDVDRAWQYV--LKSDGVEQTNYLAQHYCQEAIRQISRLR 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Fpps	NP_477380.1	polyprenyl_synt	112..373	CDD:459773	61/304 (20%)
pdss1	NP_001017656.1	Isoprenoid_Biosyn_C1	92..409	CDD:469660	74/361 (20%)