DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fpps and FDPS

DIOPT Version :10

Sequence 1:NP_477380.1 Gene:Fpps / 36209 FlyBaseID:FBgn0025373 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001995.1 Gene:FDPS / 2224 HGNCID:3631 Length:419 Species:Homo sapiens


Alignment Length:343 Identity:159/343 - (46%)
Similarity:225/343 - (65%) Gaps:4/343 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 VSKDESRDFMAVFPDLVRDITTVTKAY-NCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVP 142
            |...|.:||:..|..:||.:|.....: ...||.....:||:||...||.|||:..|:.::.||.
Human    75 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVE 139

  Fly   143 TQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENA 207
            .:....::::.|..:|||||:||:||:::||:||:|.|||||.||::...|||.|||||.::|..
Human   140 PRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEAC 204

  Fly   208 MYAILKKHFSHLDCYVALMELFHEITYITTCGQSLDQLNS---NRCVSEFTMENYKAIVENKTAY 269
            :|.:||.:......|:.|:|||.:.:|.|..||:||.|.:   |..:..||.:.||:||:.|||:
Human   205 IYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAF 269

  Fly   270 YSFYLPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCS 334
            ||||||.|.|:::||....:....:|.||||||.|||:|||:||.||:|.|||||||||||||||
Human   270 YSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCS 334

  Fly   335 WLAVVAMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTS 399
            ||.|..:|||..||.||:.:.||::|..||.|||.||:||.||:.:..:||:||:.|...|:|.:
Human   335 WLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYA 399

  Fly   400 RGVPHQTFLQILNKIYQR 417
            ..:|...||.:..|||:|
Human   400 APLPPAVFLGLARKIYKR 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FppsNP_477380.1 polyprenyl_synt 112..373 CDD:459773 131/263 (50%)
FDPSNP_001995.1 polyprenyl_synt 108..373 CDD:459773 131/264 (50%)

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