Protein Alignment Fpps and Pdss1

DIOPT Version :9

• Sequence 1: NP_477380.1
• Gene: Fpps / 36209
• FlyBaseID: FBgn0025373
• Length: 419
• Species: Drosophila melanogaster
• Sequence 2: XP_003751782.2
• Gene: Pdss1 / 100364990
• RGDID: 2319976
• Length: 500
• Species: Rattus norvegicus
• Alignment Length: 344
• Identity: 68/344 - (19%)
• Similarity: 139/344 - (40%)
• Gaps: 40/344 - (11%)

  Fly    85 RDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPE 149
            ||...::.|:.:::...|:  ...|.:::      |...:||..|.|:.||..:......:.:.|
  Rat   186 RDLKGLYEDIRKELHISTR--ELKDMSEY------YFDGKGKAFRPIIVVLMARACNIHHNNSRE 242

  Fly   150 NIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAILKK 214
            .....:.:....||:.:..::.|||:|::::|||:...:||.......:...|::..|..|:.:.
  Rat   243 MQARQRSVALVAEMIHTATLVHDDVIDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASIALARI 307

  Fly   215 HFSHLDCYVALMELFHEITYITTCGQSLDQL----NSNRCVSEFTMENYKAIVENKTAYYSFYLP 275
            .      ..|::.|..::......|:.| ||    |.|...:.:..:.:|     |||  |....
  Rat   308 G------NTAVVSLLAQVIEDLVRGEFL-QLGSKENENERFAHYLEKTFK-----KTA--SLIAN 358

  Fly   276 FALALHLAGYKDAE----AFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGK-IGTDIQDNKCSW 335
            ...|:.:.|..|..    |::..|.:    |..||:.||.||.....:..|| ...|::....:.
  Rat   359 SCKAVSVLGCPDPVVHEIAYQYGKNV----GIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATG 419

  Fly   336 LAVVAMQRANVEQKQIMVDCYGKEEPAKVERVKE-LYKELGLPSTYAIFEEESYNMIKTHIQQTS 399
            ..:.|.|:.......||   .....|..|:|.:: :.:..|:..|..:.::..:..:: .|::..
  Rat   420 PVLFACQQFPEMNAMIM---RRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHKAVR-EIRKLR 480

  Fly   400 RGVPHQTFLQILNKIYQRD 418
            ........:|:...:..||
  Rat   481 PSTERDALIQLSESVLTRD 499

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Fpps	NP_477380.1	polyprenyl_synt	119..377	CDD:278763	58/267 (22%)
Pdss1	XP_003751782.2	PLN02890	74..500	CDD:178478	68/344 (20%)
		Isoprenoid_Biosyn_C1	191..498	CDD:294142	64/336 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0142
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810