DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dare and arh1

DIOPT Version :9

Sequence 1:NP_477150.1 Gene:dare / 36203 FlyBaseID:FBgn0015582 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_596413.1 Gene:arh1 / 2541049 PomBaseID:SPBC3B8.01c Length:469 Species:Schizosaccharomyces pombe


Alignment Length:475 Identity:184/475 - (38%)
Similarity:259/475 - (54%) Gaps:59/475 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 QSTTPTKRICIVGAGPAGFYAAQLILKQLDNCVVDVVEKLPVPFGLVRFGVAPDHPEVKNVINTF 88
            |:::|.  :.|:|:|||.||.|..:|:...|..:|:.|..||||||||:||||||||||:|.:.|
pombe    13 QTSSPV--VGIIGSGPAAFYTAHRLLRNDPNVKIDMFESRPVPFGLVRYGVAPDHPEVKHVEHKF 75

  Fly    89 TKTAEHPRLRYFGNISLGTDVSLRELRDRYHAVLLTYGADQDRQLELENEQLDNVISARKFVAWY 153
            ::.||..:.|:.||:::|||||||:|...|..::|.|||..|::|.:..|.|..|.|||:.|.||
pombe    76 SEIAESTQFRFLGNVNVGTDVSLRDLTKNYDCLVLAYGAAGDKRLGIPGEDLSGVYSAREVVGWY 140

  Fly   154 NGLPGAENLAPDLSG-RDVTIVGQGNVAVDVARMLLSPLDALKTTDTTEYALEALSCSQVERVHL 217
            |..|..:||..|||. .|..::|.|||::||||:|||....|..||.....|::|..|.::|:|:
pombe   141 NSDPRNQNLELDLSQVEDAVVIGHGNVSLDVARILLSNPAQLSPTDINPLFLKSLERSNLKRLHI 205

  Fly   218 VGRRGPLQAAFTIKELREMLKLP---------NVDTRWRTE-DFSGIDMQLDKLQRPRKRLTELM 272
            ||||.....:||||||||:..|.         |..|:|..| |.||:|       ||||||.:|:
pombe   206 VGRRNIFSVSFTIKELRELFALSSAVFFAPSFNYSTKWMNETDASGLD-------RPRKRLLKLL 263

  Fly   273 L----KSLKEQGRISGSKQ---------FLPIFLRAPKAIAPGEME---FSVTELQQEAAVPTSS 321
            :    |::.|:.....||.         ..|:.:...|    |.:|   |.:|:..:..|....:
pombe   264 VSEIQKAVSEKRVAPYSKDKKCWNLEFGLTPVEILGHK----GNVENVRFQITDSIRTDAESKFT 324

  Fly   322 TERLPSHLILRSIGYKS----SCVDTGINFDTRRGRVHNINGRILKDDATGEVDPGLYVAGWLGT 382
            |  :|:.|.:|||||||    ...|.|:.||..:|.|.|:|         |.|.||:|.:||:..
pombe   325 T--IPAQLFIRSIGYKSMPLPGMKDVGVPFDDAKGIVKNVN---------GFVRPGIYTSGWVKH 378

  Fly   383 GPTGVIVTTMNGAFAVAKTICDDINTNALDTSSVKPGYDADGKRVVT----WDGWQRINDFESAA 443
            ||.|||.|||..|||.|.||..|..:......:.|.|:|...|.:.|    |..|:.|.:.|...
pombe   379 GPIGVIATTMMDAFATADTITKDWKSKKEFLKNSKLGWDGLKKNIKTPVIHWKDWKVIRNAEIER 443

  Fly   444 GKAKGKPREKIVSIEEMLRV 463
            |.......||..|.|:|:::
pombe   444 GLRHESLSEKFRSNEDMIKL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dareNP_477150.1 PLN02852 10..465 CDD:215457 184/475 (39%)
NAD_binding_8 34..98 CDD:290186 34/63 (54%)
arh1NP_596413.1 PLN02852 1..462 CDD:215457 184/472 (39%)
NAD_binding_8 21..>66 CDD:290186 25/44 (57%)
PI-PLCc_GDPD_SF 149..>276 CDD:301322 54/133 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 126 1.000 Domainoid score I1393
eggNOG 1 0.900 - - E1_COG0493
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3033
Inparanoid 1 1.050 281 1.000 Inparanoid score I669
OMA 1 1.010 - - QHG63565
OrthoFinder 1 1.000 - - FOG0004755
OrthoInspector 1 1.000 - - oto101148
orthoMCL 1 0.900 - - OOG6_101920
Panther 1 1.100 - - LDO PTHR11938
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R27
SonicParanoid 1 1.000 - - X3346
TreeFam 1 0.960 - -
1413.860

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