DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dare and fdxr

DIOPT Version :9

Sequence 1:NP_477150.1 Gene:dare / 36203 FlyBaseID:FBgn0015582 Length:466 Species:Drosophila melanogaster
Sequence 2:XP_003199702.2 Gene:fdxr / 100536115 ZFINID:ZDB-GENE-130613-2 Length:486 Species:Danio rerio


Alignment Length:472 Identity:232/472 - (49%)
Similarity:301/472 - (63%) Gaps:37/472 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RGLHTSSARLQVIQSTTPTKRICIVGAGPAGFYAAQLILKQLDNCVVDVVEKLPVPFGLVRFGVA 75
            |||.:.||            |:|:||.||||||.||.:||...:.|||:.|:|||||||||||||
Zfish    32 RGLSSVSA------------RVCVVGGGPAGFYTAQQLLKARQDAVVDIYERLPVPFGLVRFGVA 84

  Fly    76 PDHPEVKNVINTFTKTAEHPRLRYFGNISLGTDVSLRELRDRYHAVLLTYGADQDRQLELENEQL 140
            ||||||||||||||:||:|.|..:.||:::|.||::.|||..||||:|:|||:.:|.:.:..|.|
Zfish    85 PDHPEVKNVINTFTQTAQHERCSFHGNVNVGKDVTIEELRQAYHAVVLSYGAEGNRSMGIPGEDL 149

  Fly   141 DNVISARKFVAWYNGLPGAENLAPDLSGRDVTIVGQGNVAVDVARMLLSPLDALKTTDTTEYALE 205
            .||.||:.||.||||:|....|.||||.....::||||||:||||:||||:|.||.||.|:.|||
Zfish   150 CNVFSAKDFVGWYNGVPSNTELCPDLSCETAVVLGQGNVALDVARILLSPVDMLKETDITQNALE 214

  Fly   206 ALSCSQVERVHLVGRRGPLQAAFTIKELREMLKLPNVDTRWRTEDFSGIDMQLDKLQRPRKRLTE 270
            ||:.|.|.||.:||||||||.|.||||||||:.|||........||.||...|.:|.|||||||:
Zfish   215 ALTGSNVRRVLIVGRRGPLQIACTIKELREMVNLPNTRADMLPADFEGIAEALKELPRPRKRLTD 279

  Fly   271 LMLKSLKEQGRISGSKQFLPIFLRAPKAIAPG-------EMEFSVTELQQEA----AVPTSSTER 324
            ||:|::||.|.....|.:...|.|:|..:..|       .:..::.:|:.|.    :|||...|.
Zfish   280 LMMKAVKEGGDEKLEKSWGFRFFRSPVEVLAGVDGKKAAGVRLALNKLEGEGEGARSVPTGQLED 344

  Fly   325 LPSHLILRSIGYKSSCVDTGINFDTRRGRVHNINGRILKDDATGEVDPGLYVAGWLGTGPTGVIV 389
            :...||:.||||||..::..:.||.|:..|.|..||:  .||     .|||.:||:..||||||.
Zfish   345 VDCGLIISSIGYKSLPIEPTVPFDPRKAIVPNDMGRV--QDA-----EGLYCSGWVKRGPTGVIA 402

  Fly   390 TTMNGAFAVAKTICDDINTNALDTSSVKPGYDA-------DGKRVVTWDGWQRINDFESAAGKAK 447
            ||||.:|..|:.|..|:.|..||.|..|||.:|       .|.|:|.:..|::||..|...|||.
Zfish   403 TTMNDSFDTARVIIQDMETGKLDVSVNKPGAEAITGLLQTRGVRMVLFSEWEKINAEEERRGKAL 467

  Fly   448 GKPREKIVSIEEMLRVA 464
            ||||||::.:|:||::|
Zfish   468 GKPREKLLDVEKMLKIA 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dareNP_477150.1 PLN02852 10..465 CDD:215457 232/472 (49%)
NAD_binding_8 34..98 CDD:290186 47/63 (75%)
fdxrXP_003199702.2 PLN02852 17..484 CDD:215457 231/470 (49%)
NAD_binding_8 43..>88 CDD:290186 31/44 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595437
Domainoid 1 1.000 215 1.000 Domainoid score I2672
eggNOG 1 0.900 - - E1_COG0493
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3033
Inparanoid 1 1.050 418 1.000 Inparanoid score I1783
OMA 1 1.010 - - QHG63565
OrthoDB 1 1.010 - - D1324510at2759
OrthoFinder 1 1.000 - - FOG0004755
OrthoInspector 1 1.000 - - oto40864
orthoMCL 1 0.900 - - OOG6_101920
Panther 1 1.100 - - LDO PTHR11938
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R27
SonicParanoid 1 1.000 - - X3346
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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