DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dare and fdxr

DIOPT Version :9

Sequence 1:NP_477150.1 Gene:dare / 36203 FlyBaseID:FBgn0015582 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001121527.1 Gene:fdxr / 100158651 XenbaseID:XB-GENE-993398 Length:487 Species:Xenopus tropicalis


Alignment Length:485 Identity:230/485 - (47%)
Similarity:307/485 - (63%) Gaps:33/485 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CLNIFRRGLHTSSARLQ-VIQSTTPTKRICIVGAGPAGFYAAQLILKQLDNCVVDVVEKLPVPFG 68
            ||.:.|..|....|.:| ...|.:||..|||||:||||||.||.||:......||:.||||||||
 Frog     7 CLRVPRGRLLLLPAGVQRSFSSVSPTPHICIVGSGPAGFYTAQHILRHNPQAQVDIYEKLPVPFG 71

  Fly    69 LVRFGVAPDHPEVKNVINTFTKTAEHPRLRYFGNISLGTDVSLRELRDRYHAVLLTYGADQDRQL 133
            |||||||||||||||||||||:||...|..:.||:::|.||::.||:..||||:|:|||:..|:|
 Frog    72 LVRFGVAPDHPEVKNVINTFTQTARSERCTFLGNVTVGRDVTVEELQGAYHAVVLSYGAEDKREL 136

  Fly   134 ELENEQLDNVISARKFVAWYNGLPGAENLAPDLSGRDVTIVGQGNVAVDVARMLLSPLDALKTTD 198
            .:..|:|..|.|||.||.||||||...:|.||||.....|:||||||:|:||:||||:|.|:.||
 Frog   137 GIPGEELPGVHSARDFVGWYNGLPDNRHLHPDLSCDTAVILGQGNVALDIARILLSPVDILRKTD 201

  Fly   199 TTEYALEALSCSQVERVHLVGRRGPLQAAFTIKELREMLKLPNVDTRWRTEDFSGIDMQLDKLQR 263
            .|:.||:|||.|::.||.:||||||||.||||||||||:.||....:....|:.|::.....|.|
 Frog   202 ITQTALDALSQSRIRRVWMVGRRGPLQVAFTIKELREMINLPGTRPKLDPADYVGLEKASKDLPR 266

  Fly   264 PRKRLTELMLK-SLKEQGR------ISGSKQFLPIFLRAPKAIAPGE-------MEFSVTEL--- 311
            ||||||||::| :|::.|:      ....:::...|||:|.|:.|.|       :..|||.|   
 Frog   267 PRKRLTELLVKAALEKPGQKVAANWAQAEREWGLRFLRSPLAVLPSEDGKRAARIRLSVTRLEGS 331

  Fly   312 -QQEAAVPTSSTERLPSHLILRSIGYKSSCVDTGINFDTRRGRVHNINGRILKDDATGEVDPGLY 375
             :...||||...|.:...||..||||||..:.:.:.|..::|.:.|..||:       |..||||
 Frog   332 GETAVAVPTGQVENISCGLIFSSIGYKSVSISSTVPFLPQQGVIPNSMGRV-------EGIPGLY 389

  Fly   376 VAGWLGTGPTGVIVTTMNGAFAVAKTICDDINTNALDTSSVKPGYDA-------DGKRVVTWDGW 433
            .:||:..||||||.|||..:|..|:.|.:|:...||:.|..:||..|       .|.:.|::..|
 Frog   390 CSGWVKRGPTGVITTTMTDSFDTAQAILEDVQLGALNWSEPRPGSVAIRELLHLRGIQPVSFSDW 454

  Fly   434 QRINDFESAAGKAKGKPREKIVSIEEMLRV 463
            ::|::.|:|.|.|.|||||||:..||||::
 Frog   455 EKIDEAETAKGLAVGKPREKILDTEEMLQL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dareNP_477150.1 PLN02852 10..465 CDD:215457 228/480 (48%)
NAD_binding_8 34..98 CDD:290186 47/63 (75%)
fdxrNP_001121527.1 PLN02852 12..482 CDD:215457 226/476 (47%)
NAD_binding_8 37..>82 CDD:290186 32/44 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 204 1.000 Domainoid score I2881
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3033
Inparanoid 1 1.050 404 1.000 Inparanoid score I1857
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1324510at2759
OrthoFinder 1 1.000 - - FOG0004755
OrthoInspector 1 1.000 - - oto103568
Panther 1 1.100 - - LDO PTHR11938
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R27
SonicParanoid 1 1.000 - - X3346
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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