DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbl6 and AT5G21900

DIOPT Version :10

Sequence 1:NP_610665.2 Gene:Fbl6 / 36201 FlyBaseID:FBgn0033609 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_680178.1 Gene:AT5G21900 / 832250 AraportID:AT5G21900 Length:544 Species:Arabidopsis thaliana


Alignment Length:362 Identity:75/362 - (20%)
Similarity:142/362 - (39%) Gaps:87/362 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 LKLKWFVDNRCS-ACTDLNVSNWKISDINCFLAKLSSGCPNLAGITLSGWKGFTSDHLTYLVDNM 415
            :.||..:.:.|. :.||..        ||.|..:..:|.|:|..::|.|....|.:.|..:..:.
plant   224 VSLKVLILDLCGRSMTDYT--------INQFFKRAPNGFPSLTTLSLQGAFCLTDNALLLISKSS 280

  Fly   416 HKLQRLDLSSIN------VEMNASKSAVGVNSL----CNALQTMGSRLTHLY----LAHNRLAGI 466
            ..||.::|:..:      :.:.|.|....:..|    |..::......:.||    |.:..:||:
plant   281 PLLQYINLTECSLLTYRALRILADKFGSTLRGLSIGGCQGIKKHKGFSSSLYKFEKLNYLSVAGL 345

  Fly   467 PQI-VGIL-------STHCPNLTLLDLSNVTTQATSHGVLHIEKLQRGCQKLKVLRVTNSHITPS 523
            ..: .|::       |:...:|:|.:.:.||.:...|       :.|.|:||:.|.:|       
plant   346 VSVNDGVVRSFFMFRSSILTDLSLANCNEVTDECMWH-------IGRYCKKLEALDIT------- 396

  Fly   524 TASMQEIMDSPGFPELEELSVAALTDESRIISDDHLQRILKSSSKLKLLDVRNCTRLTHE---SL 585
                          :|::     |||:|       |:.|.:....||.|.:.: .|.:.|   :.
plant   397 --------------DLDK-----LTDKS-------LEFITEGCRYLKSLKLTS-NRFSDECIAAF 434

  Fly   586 IRLPAWDIKHLFLSGCSVTRDMGSGLELIASKWAHSLIELDLAWAN--MQQPIDNALRALAEKGR 648
            :.:....::.|.|   :..||:|.......:|....|..|||:|..  .:..:...||..     
plant   435 LEVSGGSLRELCL---NKVRDVGPETAFSLAKVCKMLQFLDLSWCRRLKEDDLRRILRCC----- 491

  Fly   649 DSPLAHLNLCG-SSVSDEAVKEILTNCQNMSSINLAS 684
             |.|..|.|.| :.|.|..::|:..:..:::.:.|.|
plant   492 -SSLQSLKLFGWTQVEDTYLEELSRSDVHITGLKLTS 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbl6NP_610665.2 PLN03237 <3..254 CDD:215641
F-box_FBXL6 291..336 CDD:438891
leucine-rich repeat 365..391 CDD:275381 6/25 (24%)
LRR <366..>521 CDD:443914 37/176 (21%)
leucine-rich repeat 392..417 CDD:275381 5/24 (21%)
leucine-rich repeat 418..445 CDD:275381 7/36 (19%)
leucine-rich repeat 453..471 CDD:275381 5/22 (23%)
leucine-rich repeat 480..509 CDD:275381 7/28 (25%)
leucine-rich repeat 510..538 CDD:275381 3/27 (11%)
leucine-rich repeat 539..579 CDD:275381 10/39 (26%)
leucine-rich repeat 580..621 CDD:275381 7/43 (16%)
leucine-rich repeat 622..649 CDD:275381 7/28 (25%)
leucine-rich repeat 652..676 CDD:275381 7/24 (29%)
leucine-rich repeat 677..698 CDD:275381 2/8 (25%)
AT5G21900NP_680178.1 AMN1 221..405 CDD:187754 44/221 (20%)
leucine-rich repeat 228..244 CDD:275381 3/23 (13%)
leucine-rich repeat 257..282 CDD:275381 5/24 (21%)
leucine-rich repeat 283..309 CDD:275381 5/25 (20%)
leucine-rich repeat 310..354 CDD:275381 8/43 (19%)
AMN1 <357..507 CDD:187754 43/199 (22%)
leucine-rich repeat 364..389 CDD:275381 7/31 (23%)
leucine-rich repeat 390..415 CDD:275381 10/57 (18%)
leucine-rich repeat 416..441 CDD:275381 5/25 (20%)
leucine-rich repeat 442..467 CDD:275381 6/27 (22%)
leucine-rich repeat 468..493 CDD:275381 7/30 (23%)
leucine-rich repeat 494..516 CDD:275381 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.

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