DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbl6 and Fbxl22

DIOPT Version :10

Sequence 1:NP_610665.2 Gene:Fbl6 / 36201 FlyBaseID:FBgn0033609 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_001102239.1 Gene:Fbxl22 / 363083 RGDID:1311830 Length:236 Species:Rattus norvegicus


Alignment Length:202 Identity:60/202 - (29%)
Similarity:83/202 - (41%) Gaps:45/202 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 CLPTLF---------RLGRVCSLWRQVSLRPTLWRTM---DLTTWVKEKYR-----TELKLKWFV 358
            ||..||         .|.|.||..|.|...||||..:   .||...|:.:|     ..|.:.|. 
  Rat    10 CLLRLFSFLDKDSRKSLSRTCSQLRDVFEDPTLWSLLHFHSLTELKKDNFRLSPALRSLSICWH- 73

  Fly   359 DNRCSACTDLNVSNWKISD------------INCFLAKLSSGCPNLAGITLSGWKGFTSDHLTYL 411
            .:|...|   ::.:|..|.            :|.||.::.:.|||||.:||||....|.|.|..|
  Rat    74 SSRVQVC---SIEDWLKSAFQRSICSQHENLVNDFLLQVCNRCPNLASVTLSGCGHVTDDCLARL 135

  Fly   412 VDNMHKLQRLDLSSINVEMNASKSAVGVNSLCNALQTMGSRLTHLYLAHN-RLAGIPQIVGILST 475
            :....:|:.|.|.:.....|.:.:||..:.  .||||.     |:....| ..||:.:    |..
  Rat   136 LLGCPRLRALRLENCARVTNRTLAAVAAHG--RALQTF-----HVDFCRNVSAAGLLR----LRA 189

  Fly   476 HCPNLTL 482
            .||||.|
  Rat   190 ACPNLIL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbl6NP_610665.2 PLN03237 <3..254 CDD:215641
F-box_FBXL6 291..336 CDD:438891 13/33 (39%)
leucine-rich repeat 365..391 CDD:275381 7/37 (19%)
LRR <366..>521 CDD:443914 38/130 (29%)
leucine-rich repeat 392..417 CDD:275381 10/24 (42%)
leucine-rich repeat 418..445 CDD:275381 6/26 (23%)
leucine-rich repeat 453..471 CDD:275381 4/18 (22%)
leucine-rich repeat 480..509 CDD:275381 2/3 (67%)
leucine-rich repeat 510..538 CDD:275381
leucine-rich repeat 539..579 CDD:275381
leucine-rich repeat 580..621 CDD:275381
leucine-rich repeat 622..649 CDD:275381
leucine-rich repeat 652..676 CDD:275381
leucine-rich repeat 677..698 CDD:275381
Fbxl22NP_001102239.1 F-box_FBXL22 3..45 CDD:438901 14/34 (41%)
AMN1 44..>191 CDD:187754 41/161 (25%)
leucine-rich repeat 116..141 CDD:275381 10/24 (42%)
leucine-rich repeat 142..167 CDD:275381 6/26 (23%)
leucine-rich repeat 168..193 CDD:275381 9/33 (27%)
Blue background indicates that the domain is not in the aligned region.

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