DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbl6 and Fbxl12

DIOPT Version :10

Sequence 1:NP_610665.2 Gene:Fbl6 / 36201 FlyBaseID:FBgn0033609 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_001386748.1 Gene:Fbxl12 / 313782 RGDID:1305528 Length:326 Species:Rattus norvegicus


Alignment Length:437 Identity:91/437 - (20%)
Similarity:146/437 - (33%) Gaps:151/437 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 LPEEVLFRIFEHAVDTQGCLPT--LFRLGRVCSLWRQVSLRPTLWRTMDLTTWVKEKYRTELKLK 355
            ||:.||..||.:       ||.  ..|:.|||..|:::.....|||.:|||.     |....|:.
  Rat     7 LPDLVLLEIFSY-------LPVRDRIRISRVCHRWKRLVDDRWLWRHVDLTL-----YTMRPKVM 59

  Fly   356 WFVDNR--CSACTDLNVSNWKISDIN------CFLAKLSSGCPNLAGITLSGWKGFTSDHLTYLV 412
            |.:..|  .|....|.:..:..|...      ..:..|...||||..:.|         |:    
  Rat    60 WHLLRRYMASRLHSLRMGGYLFSGSQAPQLSPALMRALGQKCPNLKRLCL---------HV---- 111

  Fly   413 DNMHKLQRLDLSSINVEMNASKSAVGVNSLCNALQTMGSRLTHLYLAHNRLAGIPQIVGILSTHC 477
                               |..|.|.:.||.:.|:|:......:.:...:....|.::       
  Rat   112 -------------------ADLSMVPITSLPSTLRTLELHSCEISMIWLQKEQDPTVL------- 150

  Fly   478 PNLTLLDLSNVTTQATSHGVLHIEKLQRGCQKLKVLRVTNSHITPSTASMQEI-MDSPGFPELEE 541
            |.|..:.|..|......|       || |..:.:.||   |.:...|..:.|. :||    .|:|
  Rat   151 PLLECIVLDRVPAFRDEH-------LQ-GLTRFRALR---SLVLGGTYRVTETGLDS----SLQE 200

  Fly   542 LSVAALTDESRIISDDHLQRILKSSSKLKLLDVRNCTRLTHESLIRLPAWDIKHLFLSGCSVTRD 606
            ||              :|||          |:|..||.....:|:.:.    :||        ||
  Rat   201 LS--------------YLQR----------LEVLGCTLSADSTLLAIS----RHL--------RD 229

  Fly   607 MGSGLELIASKWAHSLIELDLAWANMQQPIDNALRALAEKGRDSPLAHLNLCGSSVSDE--AVKE 669
            :......:....|..|:.|:      ..|:   |.:|..:|   ||         ::.|  ...:
  Rat   230 VRKIRLTVGGLSAQGLVFLE------GMPV---LESLCFQG---PL---------ITPEMPTPAQ 273

  Fly   670 ILTNCQNMSSINLAS---------------CRGLPRGVKRLMQGPQE 701
            |:::|..|..:.:..               |:|||..:..:...|:|
  Rat   274 IVSSCLTMPKLRVLEVQGLGWEGQEAEKVLCKGLPHCLVIVRACPKE 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbl6NP_610665.2 PLN03237 <3..254 CDD:215641
F-box_FBXL6 291..336 CDD:438891 14/44 (32%)
leucine-rich repeat 365..391 CDD:275381 4/31 (13%)
LRR <366..>521 CDD:443914 28/160 (18%)
leucine-rich repeat 392..417 CDD:275381 3/24 (13%)
leucine-rich repeat 418..445 CDD:275381 5/26 (19%)
leucine-rich repeat 453..471 CDD:275381 1/17 (6%)
leucine-rich repeat 480..509 CDD:275381 7/28 (25%)
leucine-rich repeat 510..538 CDD:275381 7/28 (25%)
leucine-rich repeat 539..579 CDD:275381 10/39 (26%)
leucine-rich repeat 580..621 CDD:275381 6/40 (15%)
leucine-rich repeat 622..649 CDD:275381 6/26 (23%)
leucine-rich repeat 652..676 CDD:275381 4/25 (16%)
leucine-rich repeat 677..698 CDD:275381 5/35 (14%)
Fbxl12NP_001386748.1 F-box_SF 7..45 CDD:459239 14/44 (32%)
leucine-rich repeat 104..125 CDD:275381 8/52 (15%)
AMN1 121..>226 CDD:187754 32/154 (21%)
leucine-rich repeat 126..152 CDD:275381 3/32 (9%)
leucine-rich repeat 153..177 CDD:275381 7/31 (23%)
leucine-rich repeat 178..203 CDD:275381 11/45 (24%)
leucine-rich repeat 204..229 CDD:275381 10/46 (22%)
leucine-rich repeat 230..253 CDD:275381 3/28 (11%)
leucine-rich repeat 254..283 CDD:275381 9/40 (23%)
Blue background indicates that the domain is not in the aligned region.

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