DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9062 and DUF1

DIOPT Version :10

Sequence 1:NP_001260886.1 Gene:CG9062 / 36199 FlyBaseID:FBgn0033607 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_014554.1 Gene:DUF1 / 854066 SGDID:S000005447 Length:1116 Species:Saccharomyces cerevisiae


Alignment Length:833 Identity:166/833 - (19%)
Similarity:290/833 - (34%) Gaps:264/833 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GKLY--SAGRD-AIIRVWNTRTDSSEKYIQS--------MEHHNDWVNDIVLCCNGRNLISASCD 94
            ||.|  ::||| :||...||:..:..:...:        |:.|:||.:|:: ..|.:|...::.|
Yeast    36 GKNYFLTSGRDGSIILHKNTQLSNEPETAATTIKNDAIRMQVHSDWASDLI-HVNMKNSDPSAGD 99

  Fly    95 TTVKV----------WNAQKGFCMST-----LRTHRDYVQALA---------YAKDREQ------ 129
            |.:.|          .|||    ::|     :..|.||::.:.         |..:.::      
Yeast   100 TFISVSHDFSIVLISVNAQ----LTTWDKKIIGDHDDYIKCIVPIHYEMSNDYELEEQEGGPDNV 160

  Fly   130 -----------------VASAGLDKAIFLWDVNT-----LTALTASNNTVTTSSLTGSKDSI--- 169
                             ..:.|||:.|.||.:::     .|.|...:|  ..|:.|||..|:   
Yeast   161 HDGINNGIVVDEQNNFLFVTGGLDRKIKLWCLSSGPEKMATLLHTFDN--AQSNDTGSIYSMSPI 223

  Fly   170 ---YSLAMNPSGTV--IVSGSTENILRIWDPRTCMRRMKL----RGHTENVRCLVVSPDGNQVVS 225
               ||...|.:...  .|:|.....|..:   :|..|.::    ..|..|::.:....|..:::|
Yeast   224 IPKYSFDDNQTSRPFDFVAGDCNGDLIFY---SCKYRKEVIRIQNAHRTNIKVVRTLDDSTRLIS 285

  Fly   226 GSSDGTIKVWNLG--QQRCVQTIHVHKE-GVWS------LLMSENFQYIISGSRDRNIIVTEMRN 281
            .||||.|.||:|.  ..:....:.:.|: |.||      .:...:...:..|....|::...:.:
Yeast   286 TSSDGVINVWDLNCRHDQTTGALQLPKKIGSWSWDSSIWCVQGTSLDKLYFGDSQGNVMRANLSS 350

  Fly   282 PSNKTLV----------------CEEQAPVLSLGYNIDKTGVWATTWNSDIRCWKLP----MYDR 326
            ..:..|.                .|||        ||..|......:...:....||    ::..
Yeast   351 YEDAKLTRIFKPDHHHHHHHHHEHEEQ--------NISTTDAKVKKYGGILDIALLPNEKLLFSF 407

  Fly   327 CTLNSSGGMDAQWTQGGTEVACIKGGAAIKECAVLNDKRYIITKDSQDQVVVYDVLRVVKKEQLG 391
            ||.::...:|..    ....:..:||.|:...::|.::|::||::::.|:..:|   :|..|.|.
Yeast   408 CTDSNLNVLDLT----NNHFSVNEGGFALTRSSLLTNRRHVITENTKGQMQRWD---IVSCELLN 465

  Fly   392 AVD-----FEAEVKKRNKQVYIPNWFTVDLKTGM----------PTIVLGQEEVDCFSAWVSIEA 441
            ..|     |:..|.|...:..:.:|.||.:|.||          .|.|.|....| :....:||.
Yeast   466 TFDSSEGSFDDIVMKYTSKEILSHWCTVSVKVGMLFVKINPKFLKTEVYGSALKD-YQVVNNIEI 529

  Fly   442 GLPECVDPTTEIKINYGKLLLEALLEYWTPPHSIPPNEMEPDMHGNGYFQVPKHTPV---IFSEV 503
            ...|        :.|.||:::.:|.           ||...       ::|.|...:   ||| :
Yeast   530 NSDE--------RYNLGKIVINSLF-----------NEFIS-------YEVQKDKLLRKKIFS-L 567

  Fly   504 GGRTVCRLLVRDAAGDSES------------------------------------------TLLH 526
            ..:.:...|..|...:|||                                          |::.
Yeast   568 KKKDLTNSLTLDTGYNSESKKNNKDKKRKSTFKISSTLSIGNTNSSGTPPNSAPATPVMAETIVL 632

  Fly   527 ETAP--QWVTDVVIEKNIPKFLKIPFFLQPHPQMTKPE-RTKKD-RLVANEFIQCRKVCEHVLEK 587
            |..|  |..:|..|:.::.       .:||.|...||. ||:.. .|::.:|...|.........
Yeast   633 EEQPLLQSASDKAIDDSLE-------LVQPLPASKKPYFRTQSSGSLLSRKFKSFRSTSGRATTG 690

  Fly   588 VLNAETTPSG---------------GNANNSLQNSQSDANSEG----------SQLPAEERIELW 627
             ||....|.|               ..|.|:.|.|: ||..|.          .:|.|....:|.
Yeast   691 -LNTPEEPKGILPDTPHVINDDSAFPQAINTTQQSK-DATPESMLWNHPFKLEQKLSAISSQDLP 753

  Fly   628 CNDVVVDPNMDLRTVRHFIWKQSTDLTFQYKTKQNFNYDGSIGDSLERVTRKY 680
            .|:.    :..||:..:.....::.|....|.|..|     :.|.||::...|
Yeast   754 SNNT----HNKLRSSENSRANSTSTLEGNEKKKPEF-----MPDLLEQIQESY 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9062NP_001260886.1 WD40 27..320 CDD:238121 75/378 (20%)
WD40 repeat 77..113 CDD:293791 10/50 (20%)
WD40 repeat 118..158 CDD:293791 10/76 (13%)
WD40 repeat 170..205 CDD:293791 8/40 (20%)
WD40 repeat 211..247 CDD:293791 10/37 (27%)
WD40 repeat 253..288 CDD:293791 4/40 (10%)
WD40 repeat 295..319 CDD:293791 3/23 (13%)
DUF3337 492..658 CDD:463358 44/239 (18%)
DUF1NP_014554.1 WD40 10..296 CDD:475233 60/269 (22%)
WD40 repeat 165..207 CDD:293791 8/41 (20%)
WD40 repeat 218..264 CDD:293791 9/48 (19%)
WD40 repeat 271..309 CDD:293791 10/37 (27%)
WD40 repeat 337..383 CDD:293791 8/53 (15%)
WD40 repeat 392..418 CDD:293791 4/25 (16%)
Ubl_WDR48 1018..1098 CDD:340561
Blue background indicates that the domain is not in the aligned region.

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