DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9062 and wdr48a

DIOPT Version :10

Sequence 1:NP_001260886.1 Gene:CG9062 / 36199 FlyBaseID:FBgn0033607 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001410724.1 Gene:wdr48a / 777754 ZFINID:ZDB-GENE-061110-55 Length:678 Species:Danio rerio


Alignment Length:690 Identity:385/690 - (55%)
Similarity:493/690 - (71%) Gaps:44/690 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLTH--KTCQARKKMQVSFVIRDAEEKQHRNGVNALQLDANNGKLYSAGRDAIIRVWNTRTDSSE 63
            |.||  :....|:|:|||:||||..||.:||||||||||....:|::||||:|||:|:......:
Zfish     1 MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQD 65

  Fly    64 KYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDRE 128
            .||.|||||.||||||||||||:.|||||.|||||||||.|||||||||||:|||:|||||||:|
Zfish    66 PYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKE 130

  Fly   129 QVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIW 193
            .|||||||:.||||||||||||||||||||||||:|:||||||||||..||||||||||.:||:|
Zfish   131 LVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVW 195

  Fly   194 DPRTCMRRMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLM 258
            |||||.:.|||:|||:||:.|:::.||.|.:||||||||::|:||||||:.|..||.||||:|.:
Zfish   196 DPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQV 260

  Fly   259 SENFQYIISGSRDRNIIVTEMRNPSNKTLVCEEQAPVLSLGYNIDKT-----GVWATTWNSDIRC 318
            :|.|.::.||.|||.|..|::|||..:.|:|||:||||.:  .:|::     .:|.:|..|.:..
Zfish   261 NEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM--ELDRSADPHNAIWVSTTKSTVNK 323

  Fly   319 WKLPMYDRCTLNSSGGMDAQWTQGGTEVA-----CIKGGAAIKECAVLNDKRYIITKDSQDQVVV 378
            |.|....  ...:||..|...:...|.:.     .|||||:|.:|.:|||||:|:|||:.:.|..
Zfish   324 WSLKGIH--NFRASGDYDNDCSAPLTPLCTQPEQVIKGGASIIQCHILNDKRHILTKDTNNNVAY 386

  Fly   379 YDVLRVVKKEQLGAVDFEAEVKKRNKQVYIPNWFTVDLKTGMPTIVLGQEEVDCFSAWVSI-EAG 442
            :|||:..|.|.||.::|:.|:|||.|.||:||||:|||||||.||.|  :|.|||:||||. :||
Zfish   387 WDVLKACKVEDLGKMEFDEEIKKRFKMVYVPNWFSVDLKTGMLTITL--DESDCFAAWVSAKDAG 449

  Fly   443 L--PECVDPTTEIKINYGKLLLEALLEYWTPPHSIPPNEMEPDMH--------------GNGYFQ 491
            .  |:..||    |:|.|.|||:||||:|...| |.|.:.|.:::              ||||||
Zfish   450 FSSPDGSDP----KLNLGGLLLQALLEFWPRTH-INPMDEETELNHSSVNGEHESRIQKGNGYFQ 509

  Fly   492 VPKHTPVIFSEVGGRTVCRLLVRDAAGDSESTLLHETAPQWVTDVVIEKNIPKFLKIPFFLQPHP 556
            ||.||||||.|.||||:.|||.||:.|::||.||:||.||||.|:.::||:|||.||||:|||| 
Zfish   510 VPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPH- 573

  Fly   557 QMTKPERTKKDRLVANEFIQCRKVCEHVLEKVLNAET-TPSGGNANNSLQNSQSDANSEGSQLPA 620
            ..:..:..|||||.|::.:|.|||.|||.||::|.:: :.:||:|.....:.|.:  .|...:.|
Zfish   574 SSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDSESQTGGSAAEKPSSEQKE--DEEMAVQA 636

  Fly   621 EERIELWCNDVVVDPNMDLRTVRHFIWKQSTDLTFQYKTK 660
            ||:|||.|.|.|:|||||||||:|||||...|||..|:.|
Zfish   637 EEKIELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYRQK 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9062NP_001260886.1 WD40 27..320 CDD:238121 193/297 (65%)
WD40 repeat 77..113 CDD:293791 31/35 (89%)
WD40 repeat 118..158 CDD:293791 34/39 (87%)
WD40 repeat 170..205 CDD:293791 26/34 (76%)
WD40 repeat 211..247 CDD:293791 21/35 (60%)
WD40 repeat 253..288 CDD:293791 15/34 (44%)
WD40 repeat 295..319 CDD:293791 6/28 (21%)
DUF3337 492..658 CDD:463358 90/166 (54%)
wdr48aNP_001410724.1 WD40 30..286 CDD:238121 181/255 (71%)
WD40 repeat 35..73 CDD:293791 18/37 (49%)
WD40 repeat 79..115 CDD:293791 31/35 (89%)
WD40 repeat 120..160 CDD:293791 34/39 (87%)
WD40 repeat 172..207 CDD:293791 26/34 (76%)
WD40 repeat 213..249 CDD:293791 21/35 (60%)
WD40 repeat 255..281 CDD:293791 12/25 (48%)
DUF3337 510..674 CDD:463358 90/166 (54%)

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