DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9062 and Wdr48

DIOPT Version :10

Sequence 1:NP_001260886.1 Gene:CG9062 / 36199 FlyBaseID:FBgn0033607 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001404765.1 Gene:Wdr48 / 67561 MGIID:1914811 Length:691 Species:Mus musculus


Alignment Length:682 Identity:381/682 - (55%)
Similarity:484/682 - (70%) Gaps:46/682 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QARKKMQVSFVIRDAEEKQHRNGVNALQLDANNGKLYSAGRDAIIRVWNTRTDSSEKYIQSMEHH 72
            :|.::.:||:||||..||.:||||||||||....:|::||||:|||:|:......:.||.|||||
Mouse    25 EASRRPRVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHH 89

  Fly    73 NDWVNDIVLCCNGRNLISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDK 137
            .|||||:||||||:.|||||.|||||||||.|||||||||||:|||:|||||||:|.|||||||:
Mouse    90 TDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDR 154

  Fly   138 AIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRRM 202
            .||||||||||||||||||||||||:|:||||||||||..||:|||||||.:||:||||||.:.|
Mouse   155 QIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLM 219

  Fly   203 KLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMSENFQYIIS 267
            ||:|||:||:.|::..||.|.:||||||||::|:||||||:.|..||.||||:|.:::.|.::.|
Mouse   220 KLKGHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYS 284

  Fly   268 GSRDRNIIVTEMRNPSNKTLVCEEQAPVLSLGYNIDKT-----GVWATTWNSDIRCWKLPMYDRC 327
            |.|||.|..|::|||..:.|:|||:||||.:  .:|::     .:|..|..|.:..|.|....  
Mouse   285 GGRDRKIYCTDLRNPDIRVLICEEKAPVLKM--ELDRSADPPPAIWVATTKSTVNKWTLKGIH-- 345

  Fly   328 TLNSSGGMDAQWTQGGTEVA-----CIKGGAAIKECAVLNDKRYIITKDSQDQVVVYDVLRVVKK 387
            ...:||..|...|...|.:.     .|||||:|.:|.:|||||:|:|||:.:.|..:|||:..|.
Mouse   346 NFRASGDYDNDCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKV 410

  Fly   388 EQLGAVDFEAEVKKRNKQVYIPNWFTVDLKTGMPTIVLGQEEVDCFSAWVSI-EAGL--PECVDP 449
            |.||.||||.|:|||.|.||:||||:|||||||.||.|  :|.|||:||||. :||.  |:..||
Mouse   411 EDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITL--DESDCFAAWVSAKDAGFSSPDGSDP 473

  Fly   450 TTEIKINYGKLLLEALLEYWTPPHSIPPNEMEPDMH------------GNGYFQVPKHTPVIFSE 502
                |:|.|.|||:||||||...|..|.:|.|.:::            ||||||||.||||||.|
Mouse   474 ----KLNLGGLLLQALLEYWPRTHVTPMDEEENEVNHVSGGQESRVQKGNGYFQVPPHTPVIFGE 534

  Fly   503 VGGRTVCRLLVRDAAGDSESTLLHETAPQWVTDVVIEKNIPKFLKIPFFLQPHPQMTKPERTKKD 567
            .||||:.|||.||:.|::|:.||:||.||||.|:.::||:|||.||||:||||.. :..:..|||
Mouse   535 AGGRTLFRLLCRDSGGETEAMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHAS-SGAKTLKKD 598

  Fly   568 RLVANEFIQCRKVCEHVLEKVLN----AETTPSGGNANNSLQNSQSDANSEGSQLPAEERIELWC 628
            ||.|::.:|.|||.|||.||::|    ::||.|..|.....:..:..|      :.|||:|||.|
Mouse   599 RLSASDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKPEQEKEEDIA------VLAEEKIELLC 657

  Fly   629 NDVVVDPNMDLRTVRHFIWKQSTDLTFQYKTK 660
            .|.|:|||||||||:|||||...|||..|:.|
Mouse   658 QDQVLDPNMDLRTVKHFIWKSGGDLTLHYRQK 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9062NP_001260886.1 WD40 27..320 CDD:238121 190/297 (64%)
WD40 repeat 77..113 CDD:293791 30/35 (86%)
WD40 repeat 118..158 CDD:293791 34/39 (87%)
WD40 repeat 170..205 CDD:293791 25/34 (74%)
WD40 repeat 211..247 CDD:293791 21/35 (60%)
WD40 repeat 253..288 CDD:293791 14/34 (41%)
WD40 repeat 295..319 CDD:293791 6/28 (21%)
DUF3337 492..658 CDD:463358 89/169 (53%)
Wdr48NP_001404765.1 WD40 45..301 CDD:238121 178/255 (70%)
WD40 repeat 50..88 CDD:293791 18/37 (49%)
WD40 repeat 94..130 CDD:293791 30/35 (86%)
WD40 repeat 135..175 CDD:293791 34/39 (87%)
WD40 repeat 187..222 CDD:293791 25/34 (74%)
WD40 repeat 228..264 CDD:293791 21/35 (60%)
WD40 repeat 270..305 CDD:293791 14/34 (41%)
WD40 repeat 312..339 CDD:293791 6/28 (21%)
WD40 repeat 378..404 CDD:293791 12/25 (48%)
DUF3337 524..687 CDD:463358 89/169 (53%)

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