DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9062 and wdr48b

DIOPT Version :10

Sequence 1:NP_001260886.1 Gene:CG9062 / 36199 FlyBaseID:FBgn0033607 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_999874.1 Gene:wdr48b / 334682 ZFINID:ZDB-GENE-030131-6622 Length:677 Species:Danio rerio


Alignment Length:689 Identity:384/689 - (55%)
Similarity:490/689 - (71%) Gaps:47/689 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LTHKTCQARKKMQVSFVIRDAEEKQHRNGVNALQLDANNGKLYSAGRDAIIRVWNTRTDSSEKYI 66
            |..:....|:|:|||:||||..||.:||||||||||....:|::||||:|||:|:......:.||
Zfish     4 LHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYI 68

  Fly    67 QSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVA 131
            .|||||.||||||:|||||:.|||||.|||||||||.|||||||||||:|||:|||||||:|.||
Zfish    69 ASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 133

  Fly   132 SAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPR 196
            |||||:.||||||||||||||||||||||||:|:||||||||||.:||||:|||||.:||:||||
Zfish   134 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPR 198

  Fly   197 TCMRRMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCVQTIHVHKEGVWSLLMSEN 261
            ||.:.|||:|||:||:.|:::.||.|.:||||||||::|:||||||:.|..||.||||:|.::|.
Zfish   199 TCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEA 263

  Fly   262 FQYIISGSRDRNIIVTEMRNPSNKTLVCEEQAPVLSLGYNIDKT-----GVWATTWNSDIRCWKL 321
            |.:|.||.|||.|..|::|||..:.|:|||:||||.:  .:|::     .:|.:|..|.:..|.|
Zfish   264 FTHIYSGGRDRKIYCTDLRNPDMRVLICEEKAPVLRM--ELDRSADPPQSIWVSTTKSFVNKWSL 326

  Fly   322 -PMYDRCTLNSSGGMDAQWTQGGTEVA-----CIKGGAAIKECAVLNDKRYIITKDSQDQVVVYD 380
             .|::   ..:||..|...:...|.:.     .||||.:|.:|.:|||||:|:|||:.:.|..:|
Zfish   327 KAMHN---FRASGDYDNDCSTPLTPLCTQPEQVIKGGTSIVQCHILNDKRHILTKDTNNSVAFWD 388

  Fly   381 VLRVVKKEQLGAVDFEAEVKKRNKQVYIPNWFTVDLKTGMPTIVLGQEEVDCFSAWVSI-EAGL- 443
            ||:..|.|.||.|||:.|||||.|.||:||||:|||||||.||.|  :|.|||:|||:. :||. 
Zfish   389 VLKACKGEDLGKVDFDEEVKKRFKMVYVPNWFSVDLKTGMLTITL--DESDCFAAWVAAKDAGFT 451

  Fly   444 -PECVDPTTEIKINYGKLLLEALLEYWTPPHSIPPNEMEPDMH------------GNGYFQVPKH 495
             |:..||    |:|.|.|||:||||:|...|..|..|.|.:::            ||||||||.|
Zfish   452 SPDGSDP----KLNLGGLLLQALLEFWPRTHINPMEEEENELNHVNGEQESRIQKGNGYFQVPPH 512

  Fly   496 TPVIFSEVGGRTVCRLLVRDAAGDSESTLLHETAPQWVTDVVIEKNIPKFLKIPFFLQPHPQMTK 560
            |||||.|.||||:.|||.||:.|::||.||:||.||||.|:.::||:|||.||||:|||| ..:.
Zfish   513 TPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPH-SSSG 576

  Fly   561 PERTKKDRLVANEFIQCRKVCEHVLEKVLN----AETTPSGGNANNSLQNSQSDANSEGSQLPAE 621
            .:..|||||.|::.:|.|||.|||.||::|    ::.|.|..|.....|..:.|.:     :.||
Zfish   577 AKTLKKDRLSASDMLQVRKVMEHVYEKIINLDMESQATSSSANDKPGEQEKEEDVS-----VMAE 636

  Fly   622 ERIELWCNDVVVDPNMDLRTVRHFIWKQSTDLTFQYKTK 660
            |:|||.|.|.|:|||||||||:|||||...|||..|:.|
Zfish   637 EKIELMCLDQVLDPNMDLRTVKHFIWKSGGDLTIHYRQK 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9062NP_001260886.1 WD40 27..320 CDD:238121 192/297 (65%)
WD40 repeat 77..113 CDD:293791 30/35 (86%)
WD40 repeat 118..158 CDD:293791 34/39 (87%)
WD40 repeat 170..205 CDD:293791 25/34 (74%)
WD40 repeat 211..247 CDD:293791 21/35 (60%)
WD40 repeat 253..288 CDD:293791 16/34 (47%)
WD40 repeat 295..319 CDD:293791 6/28 (21%)
DUF3337 492..658 CDD:463358 90/169 (53%)
wdr48bNP_999874.1 WD 1 28..67 19/38 (50%)
WD40 30..300 CDD:238121 188/269 (70%)
WD40 repeat 35..73 CDD:293791 18/37 (49%)
WD 2 73..112 32/38 (84%)
WD40 repeat 79..115 CDD:293791 30/35 (86%)
WD 3 115..154 32/38 (84%)
WD40 repeat 120..160 CDD:293791 34/39 (87%)
WD 4 166..205 28/38 (74%)
WD40 repeat 172..207 CDD:293791 25/34 (74%)
WD 5 208..247 24/38 (63%)
WD40 repeat 213..249 CDD:293791 21/35 (60%)
WD 6 250..289 20/38 (53%)
WD40 repeat 255..281 CDD:293791 13/25 (52%)
WD 7 292..334 13/46 (28%)
WD40 repeat 300..330 CDD:293791 6/31 (19%)
WD 8 358..397 19/38 (50%)
DUF3337 509..673 CDD:463358 90/169 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..632 5/20 (25%)

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