DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9067 and Trappc2l

DIOPT Version :9

Sequence 1:NP_610662.1 Gene:CG9067 / 36197 FlyBaseID:FBgn0033605 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_001099663.1 Gene:Trappc2l / 292074 RGDID:1304906 Length:139 Species:Rattus norvegicus


Alignment Length:135 Identity:74/135 - (54%)
Similarity:103/135 - (76%) Gaps:1/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAFCIAVIGKDNAPLYLTTSDMEQELELQYHVNAALDVVEEK-CLIGKGAPESKELYLGLLYSTE 64
            ||.|||||.|:|.|||:.::..|.||:..|.|:.:||||:|| ..:||...:.:||||||||.||
  Rat     1 MAVCIAVIAKENYPLYIRSTPTENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLGLLYPTE 65

  Fly    65 NHKIYGFVTNTRVKFIVVIDSSNVALRENEVRAIFRNLHLLYTDAICNPFYIPGESLTSKKFDRA 129
            ::|:||:|||::|||::|:||||.|||:||:|::||.||..|||.:|||||.||:.:.|:.||..
  Rat    66 DYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSRAFDTM 130

  Fly   130 VQKLM 134
            |..:|
  Rat   131 VTSMM 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9067NP_610662.1 Sedlin_N 7..134 CDD:282482 68/127 (54%)
Trappc2lNP_001099663.1 TRAPPC2L 3..135 CDD:341444 71/131 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353707
Domainoid 1 1.000 151 1.000 Domainoid score I4266
eggNOG 1 0.900 - - E1_KOG3444
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9424
Inparanoid 1 1.050 160 1.000 Inparanoid score I4153
OMA 1 1.010 - - QHG54366
OrthoDB 1 1.010 - - D1549524at2759
OrthoFinder 1 1.000 - - FOG0004916
OrthoInspector 1 1.000 - - oto98116
orthoMCL 1 0.900 - - OOG6_103373
Panther 1 1.100 - - LDO PTHR12403
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4584
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.