DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9067 and Trappc2b

DIOPT Version :10

Sequence 1:NP_610662.1 Gene:CG9067 / 36197 FlyBaseID:FBgn0033605 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_001258040.1 Gene:Trappc2b / 100910318 RGDID:6499350 Length:140 Species:Rattus norvegicus


Alignment Length:140 Identity:36/140 - (25%)
Similarity:63/140 - (45%) Gaps:18/140 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AFCIAVIGKDNAPLY--------LTTSDMEQELELQYHVNAALDVVEEKCLIGKGAPESKELYLG 58
            :|...::|..:.|::        .|.|..|.....|:..:||||:|:|...:      |..:||.
  Rat     4 SFYFVIVGHHDNPVFEMEFLPAGKTESKDEHRHLNQFIAHAALDLVDENMWL------SNNMYLK 62

  Fly    59 LLYSTENHKIYGFVTNTRVKFIVVIDSSNVALRENEVRAIFRNLHLLYTDAICNPFYIPGESLTS 123
            .:.......:..|||...::.|::.|    ..:|:.::..|.:::.||.....||||.|...:.|
  Rat    63 TVDKFNEWFVSAFVTAGHMRLIMLHD----VRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSPIRS 123

  Fly   124 KKFDRAVQKL 133
            ..|:|.||.|
  Rat   124 TAFERKVQFL 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9067NP_610662.1 TRAPPC2L 4..135 CDD:341444 35/138 (25%)
Trappc2bNP_001258040.1 TRAPPC2_sedlin 4..138 CDD:341429 36/140 (26%)

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