DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC47D and CAM1

DIOPT Version :10

Sequence 1:NP_476968.1 Gene:TpnC47D / 36195 FlyBaseID:FBgn0010423 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001154755.1 Gene:CAM1 / 833756 AraportID:AT5G37780 Length:175 Species:Arabidopsis thaliana


Alignment Length:173 Identity:56/173 - (32%)
Similarity:97/173 - (56%) Gaps:29/173 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EDLTPEQIAVLQKAFNSFDHQ--------------------------KTGSIPTEMVADILRLMG 44
            :.||.|||:..::||:.||..                          ..|.|.|:.:..::|.:|
plant     3 DQLTDEQISEFKEAFSLFDKDGDVFVLSDLGFDFKRLSNCLETTPELSHGCITTKELGTVMRSLG 67

  Fly    45 QPFDRQILDELIDEVDEDKSGRLEFEEFVQLAAKFIVEEDDEAMQKELREAFRLYDKQGNGYIPT 109
            |......|.::|:|||.|.:|.::|.||:.|.||.:.:.|.|   :||:||||::||..||:|..
plant    68 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSE---EELKEAFRVFDKDQNGFISA 129

  Fly   110 SCLKEILKELDDQLTEQELDIMIEEIDSDGSGTVDFDEFMEMM 152
            :.|:.::..|.::||::|::.||.|.|.||.|.::::||:::|
plant   130 AELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVKIM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC47DNP_476968.1 PTZ00184 6..153 CDD:185504 56/173 (32%)
CAM1NP_001154755.1 PTZ00184 1..175 CDD:185504 56/173 (32%)

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