DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC47D and efcab2

DIOPT Version :9

Sequence 1:NP_001286310.1 Gene:TpnC47D / 36195 FlyBaseID:FBgn0010423 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001314837.1 Gene:efcab2 / 558031 ZFINID:ZDB-GENE-070521-5 Length:162 Species:Danio rerio


Alignment Length:150 Identity:34/150 - (22%)
Similarity:78/150 - (52%) Gaps:2/150 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EDLTPEQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMG-QPFDRQILDELIDEVDEDKSGRLEF 69
            |::..|....:..||:.|||:...::....:..|:|.:| .|.:.::.|.:.:..:|:.:|.:.:
Zfish     8 ENIIIETQKRIGNAFDVFDHESNKTVDVREIGTIIRSLGCFPSEAELHDIISELEEEEPTGFVRY 72

  Fly    70 EEFVQLAAKFIVEEDDEAMQKELR-EAFRLYDKQGNGYIPTSCLKEILKELDDQLTEQELDIMIE 133
            |:|:....|.::|.....:.::|. :||.:.|:|..|::..:.|.:.|.:..:..|::|:|.|:.
Zfish    73 EKFLPTMTKILLERKFRPITEDLLIQAFEVLDQQKKGHLEPAELAKYLTQEGEPFTQEEMDEMLS 137

  Fly   134 EIDSDGSGTVDFDEFMEMMT 153
            .........:.:.:|:.|||
Zfish   138 AAVDPDKNVIFYKDFVSMMT 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC47DNP_001286310.1 FRQ1 8..155 CDD:227455 32/147 (22%)
efcab2NP_001314837.1 PTZ00184 7..157 CDD:185504 32/148 (22%)
EFh 96..157 CDD:298682 13/60 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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