DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC47D and cabp7b

DIOPT Version :9

Sequence 1:NP_001286310.1 Gene:TpnC47D / 36195 FlyBaseID:FBgn0010423 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_683885.1 Gene:cabp7b / 556082 ZFINID:ZDB-GENE-060526-366 Length:213 Species:Danio rerio


Alignment Length:88 Identity:29/88 - (32%)
Similarity:51/88 - (57%) Gaps:3/88 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GRLEFEEFVQLAAKFIVEEDDEAMQKELREAFRLYDKQGNGYIPTSCLKEILKELDDQLTEQELD 129
            |.....:.:...|...:.||:   .:|:||||:::|:.|||:|....|...::.|.....|.||:
Zfish    14 GLCSIPDILSYRAPVSLPEDE---VEEIREAFKVFDRDGNGFISKQELGVAMRSLGYMPNEVELE 75

  Fly   130 IMIEEIDSDGSGTVDFDEFMEMM 152
            ::|:.:|.||.|.|||:||:.::
Zfish    76 VIIQRLDMDGDGQVDFEEFVALL 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC47DNP_001286310.1 FRQ1 8..155 CDD:227455 29/88 (33%)
cabp7bXP_683885.1 EFh 37..98 CDD:238008 25/60 (42%)
EF-hand_7 38..98 CDD:290234 24/59 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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