DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC47D and Calm2

DIOPT Version :10

Sequence 1:NP_476968.1 Gene:TpnC47D / 36195 FlyBaseID:FBgn0010423 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_059022.1 Gene:Calm2 / 50663 RGDID:2258 Length:149 Species:Rattus norvegicus


Alignment Length:150 Identity:61/150 - (40%)
Similarity:101/150 - (67%) Gaps:3/150 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EDLTPEQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDRQILDELIDEVDEDKSGRLEFE 70
            :.||.||||..::||:.||....|:|.|:.:..::|.:||......|.::|:|||.|.:|.::|.
  Rat     3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67

  Fly    71 EFVQLAAKFIVEEDDEAMQKELREAFRLYDKQGNGYIPTSCLKEILKELDDQLTEQELDIMIEEI 135
            ||:.:.|:.:.:.|.|   :|:|||||::||.|||||..:.|:.::..|.::||::|:|.||.|.
  Rat    68 EFLTMMARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 129

  Fly   136 DSDGSGTVDFDEFMEMMTGE 155
            |.||.|.|:::||::|||.:
  Rat   130 DIDGDGQVNYEEFVQMMTAK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC47DNP_476968.1 PTZ00184 6..153 CDD:185504 59/146 (40%)
Calm2NP_059022.1 PTZ00184 1..149 CDD:185504 61/148 (41%)
Necessary and sufficient for interaction with PCP4. /evidence=ECO:0000250|UniProtKB:P0DP24 77..149 34/74 (46%)

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