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Protein Alignment TpnC47D and Phf24
DIOPT Version :9
Sequence 1: | NP_001286310.1 |
Gene: | TpnC47D / 36195 |
FlyBaseID: | FBgn0010423 |
Length: | 155 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006238183.1 |
Gene: | Phf24 / 500446 |
RGDID: | 1559864 |
Length: | 400 |
Species: | Rattus norvegicus |
Alignment Length: | 96 |
Identity: | 20/96 - (20%) |
Similarity: | 43/96 - (44%) |
Gaps: | 19/96 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 DNIDEDLTPEQIAVLQKAFNSFDHQKTGSIP--TEMVADILRLMGQ-----PFDRQILDELIDE- 58
||::..||.|::..|.:.| |:...|| :..:.|.:|...| ...|.:.||..::
Rat 189 DNLNLLLTEEEMYSLTETF-----QRCKVIPDCSLTLEDFVRYRHQAAKRGDSTRALSDEQEEQA 248
Fly 59 ------VDEDKSGRLEFEEFVQLAAKFIVEE 83
:|.:..|.:|:.:|:...:..::::
Rat 249 ARQFAALDPEHRGHVEWPDFLSHESLLLLQQ 279
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
TpnC47D | NP_001286310.1 |
FRQ1 |
8..155 |
CDD:227455 |
18/90 (20%) |
Phf24 | XP_006238183.1 |
Zf_RING |
127..198 |
CDD:407013 |
4/8 (50%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166342439 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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