DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC47D and tnnc1

DIOPT Version :9

Sequence 1:NP_001286310.1 Gene:TpnC47D / 36195 FlyBaseID:FBgn0010423 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001004776.1 Gene:tnnc1 / 447990 XenbaseID:XB-GENE-480515 Length:161 Species:Xenopus tropicalis


Alignment Length:159 Identity:54/159 - (33%)
Similarity:95/159 - (59%) Gaps:5/159 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDNI----DEDLTPEQIAVLQKAFNSF-DHQKTGSIPTEMVADILRLMGQPFDRQILDELIDEVD 60
            ||:|    .|.||.||....:.||:.| ...:.|.|.|:.:..::|::||....:.|.|:|||||
 Frog     1 MDDIYKAAVEQLTEEQKNEFRAAFDIFVQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65

  Fly    61 EDKSGRLEFEEFVQLAAKFIVEEDDEAMQKELREAFRLYDKQGNGYIPTSCLKEILKELDDQLTE 125
            ||.||.::|:||:.:..:.:.::.....::||.:.||::||..:|||....||.:|:...:.:||
 Frog    66 EDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLEATGETITE 130

  Fly   126 QELDIMIEEIDSDGSGTVDFDEFMEMMTG 154
            .:::.::.:.|.:..|.:|:|||:|.|.|
 Frog   131 DDIEELMRDGDKNNDGRIDYDEFLEFMKG 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC47DNP_001286310.1 FRQ1 8..155 CDD:227455 50/148 (34%)
tnnc1NP_001004776.1 PTZ00184 9..157 CDD:185504 49/147 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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