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Protein Alignment TpnC47D and Caps2
DIOPT Version :9
Sequence 1: | NP_001286310.1 |
Gene: | TpnC47D / 36195 |
FlyBaseID: | FBgn0010423 |
Length: | 155 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006241399.1 |
Gene: | Caps2 / 366891 |
RGDID: | 1309826 |
Length: | 589 |
Species: | Rattus norvegicus |
Alignment Length: | 151 |
Identity: | 39/151 - (25%) |
Similarity: | 68/151 - (45%) |
Gaps: | 22/151 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 FNSFDHQKTGSIPTEMVAD-ILRLMGQPFDRQILDELIDEVDEDKSGR---LEFEEFVQLAAKFI 80
|.|.||. |:|..:..: :|||.....|:..||.| :....:.|| :..|...||..:.|
Rat 345 FLSCDHP---SLPKSIKENALLRLRITSIDQVALDSL--KAASAEPGREDPVSQEAQDQLVLQAI 404
Fly 81 VEEDDEAMQKE-------LREAFRLYDKQGNGYIPTSCLKEILKELDDQLTEQELD----IMIEE 134
.|:..|.:..: |.:.|:..||:|||.:..:..::.|:....:::||:.: |::..
Rat 405 QEKLKEQLHTKGVRILTGLGKYFQRLDKEGNGLLEKTDFQQALETFHLEVSEQDFESSWLILLGH 469
Fly 135 IDSDGSGTVDFDEFMEMMTGE 155
..|... ||:.||...:.||
Rat 470 GHSQNK--VDYGEFKRAIFGE 488
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166342445 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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