DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC47D and Cabp4

DIOPT Version :10

Sequence 1:NP_476968.1 Gene:TpnC47D / 36195 FlyBaseID:FBgn0010423 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_038941368.1 Gene:Cabp4 / 365394 RGDID:1306083 Length:278 Species:Rattus norvegicus


Alignment Length:145 Identity:52/145 - (35%)
Similarity:81/145 - (55%) Gaps:4/145 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DEDLTPEQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMG-QPFDRQILDELIDEVDEDKSGRLE 68
            |.:|.||::..||.||..||..:.|.|....:.|.:|.:| .|.:.::| |:...|.....|.::
  Rat   119 DRELGPEELEELQAAFEEFDTDQDGYIGHRELGDCMRTLGYMPTEMELL-EVSQHVKMRMGGFVD 182

  Fly    69 FEEFVQLAAKFIVEEDDEAM-QKELREAFRLYDKQGNGYIPTSCLKEILKE-LDDQLTEQELDIM 131
            |||||:|.:..:.||....: .:|||.|||.:||..:|.|..:.|::.... |.:.|...|||.|
  Rat   183 FEEFVELISPKLREETAHMLGVRELRIAFREFDKDRDGRITVAELRQAAPALLGEPLEGTELDEM 247

  Fly   132 IEEIDSDGSGTVDFD 146
            :.::|.:|.||:|||
  Rat   248 LRDMDLNGDGTIDFD 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC47DNP_476968.1 PTZ00184 6..153 CDD:185504 51/144 (35%)
Cabp4XP_038941368.1 PTZ00184 133..262 CDD:185504 44/129 (34%)

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