DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC47D and Caln1

DIOPT Version :9

Sequence 1:NP_001286310.1 Gene:TpnC47D / 36195 FlyBaseID:FBgn0010423 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_017453894.1 Gene:Caln1 / 363909 RGDID:1305843 Length:293 Species:Rattus norvegicus


Alignment Length:76 Identity:33/76 - (43%)
Similarity:46/76 - (60%) Gaps:5/76 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 AKFIVEEDDEAMQKELREAFRLYDKQGNGYIPTSCLKEILKELDDQLTEQELDIMIEEIDSDGSG 141
            |...|||.|     |:|||||:.|:.|||:|....|...::.|....:|.||.|:::.:|.||.|
  Rat   105 ANISVEELD-----EIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDG 164

  Fly   142 TVDFDEFMEMM 152
            .|||||||.::
  Rat   165 QVDFDEFMTIL 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC47DNP_001286310.1 FRQ1 8..155 CDD:227455 33/76 (43%)
Caln1XP_017453894.1 PTZ00184 106..>216 CDD:185504 32/75 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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